☆17Aug 20, 2024Updated 2 years ago
Alternatives and similar repositories for SPEACH_AF
Users that are interested in SPEACH_AF are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Benchmarks for reading and interpreting mmCIF files☆10Aug 30, 2021Updated 5 years ago
- Data sharing for High-throughput Prediction of Changes in Protein Conformational Distributions with Subsampled AlphaFold2☆44May 15, 2024Updated 2 years ago
- ☆16Jun 19, 2026Updated 4 months ago
- Explore protein fold space with deep generative models☆16Aug 5, 2024Updated 2 years ago
- This repository contains the AlphaCutter.py for the removal of non-globular regions from predicted protein structures.☆15Jul 25, 2023Updated 3 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Structure-based antibody renumbering☆17Updated this week
- A series of scripts that facilitate the prediction of protein structures in multiple conformations using AlphaFold2☆99Aug 29, 2023Updated 3 years ago
- ☆73Feb 13, 2026Updated 8 months ago
- ☆75Feb 13, 2026Updated 8 months ago
- Finding patch of conserved amino acid sites in 3D structure☆14Apr 13, 2025Updated last year
- ☆47Sep 16, 2024Updated 2 years ago
- Command-line Python package for metal-coordination mining and discovery of radical halogenases from AlphaFold2 structural models. Include…☆13Apr 24, 2026Updated 6 months ago
- Joint Protein-Ligand Embedding☆11Oct 3, 2025Updated last year
- ☆10Apr 12, 2023Updated 3 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- ☆15Apr 17, 2025Updated last year
- Force Field X development has moved to the SchniedersLab area of GitHub.☆17Oct 4, 2019Updated 7 years ago
- ☆11Oct 7, 2025Updated last year
- ☆24Aug 6, 2026Updated 2 months ago
- Paste a protein sequence, get an a3m. Borrows AlphaFold DB's precomputed MSAs instead of running a search.☆11Aug 8, 2026Updated 2 months ago
- List of papers on protein binding site prediction☆11Aug 11, 2023Updated 3 years ago
- Utility scripts to generate and evaluate parametrically guided beta barrel protein backbone structures.☆13Nov 14, 2025Updated 11 months ago
- Topological Data Analysis on protein structures from crystalized structures and AlphaFold DB.☆12Feb 4, 2026Updated 8 months ago
- ⛓️ Boltz with restraint-guided inference☆22Sep 28, 2026Updated last month
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- ☆20Sep 18, 2026Updated last month
- ☆95Sep 25, 2024Updated 2 years ago
- Design a local part of a protein☆20Jan 12, 2023Updated 3 years ago
- Deep generative modeling of protein structural ensembles☆41May 27, 2026Updated 5 months ago
- ☆15Mar 3, 2025Updated last year
- The software system of improving AlphaFold2- and AlphaFold-Multimer-based protein tertiary & quaternary structure prediction. It was deve…☆33Dec 14, 2023Updated 2 years ago
- Size-Wise Analysis of Transfer Learning of pLM Embeddings☆13Jun 10, 2025Updated last year
- 🧬 Large-scale protein functional residue or fragment prediction benchmark. (ICLR 2026)☆25Apr 10, 2026Updated 6 months ago
- Official repository of EnzymeFlow☆102Dec 7, 2024Updated last year
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Protein structure diffusion model for unconditional protein generation and motif scaffolding☆196Jun 24, 2024Updated 2 years ago
- Official repository for the Protriever paper☆17Jun 5, 2025Updated last year
- ProtNote is a multimodal deep learning model that leverages free-form text to enable both supervised and zero-shot protein function predi…☆65Sep 14, 2026Updated last month
- Official repo for paper "AlphaFold-Multimer accurately captures interactions and dynamics of intrinsically disordered protein regions"☆17Dec 8, 2024Updated last year
- [ICML 25] We train and evaluate SAEs to identify interpretable features in pLMs and show their potential for scientific discovery.☆129Apr 23, 2026Updated 6 months ago
- Toolkit for alphafold3 input and output files☆111Oct 23, 2026Updated last week
- ☆15Sep 4, 2026Updated last month