☆87Nov 18, 2025Updated 3 months ago
Alternatives and similar repositories for SSDraw
Users that are interested in SSDraw are comparing it to the libraries listed below
Sorting:
- A package to create, visualize, and analysis PDB-derived pseudo-ensembles.☆10Jan 7, 2026Updated last month
- Clusters protein chains based on CA distance difference☆16Feb 4, 2025Updated last year
- A protein structure dataset that combines 3D atomic coordinates with biophysical and evolutionary properties for every atom in every "cle…☆38Jul 25, 2024Updated last year
- Python tool for the discovery of similar 3D structural motifs across protein structures.☆34Nov 18, 2023Updated 2 years ago
- ☆91Sep 25, 2024Updated last year
- Evolutionary conservation estimation of residues or nucleotides☆58Mar 28, 2022Updated 3 years ago
- Automatic atomic model building program for cryo-EM maps☆161Jan 9, 2026Updated last month
- Repo for the publication titled: "Key Interaction Networks: Identifying Evolutionarily Conserved Non-Covalent Interaction Networks Across…☆18Nov 14, 2023Updated 2 years ago
- Explore protein fold space with deep generative models☆16Aug 5, 2024Updated last year
- Toolkit for alphafold3 input and output files☆97Updated this week
- Structure-conditioned masked language modeling for protein sequence design☆71Jan 31, 2024Updated 2 years ago
- Structure prediction of alternative protein conformations☆82Feb 24, 2025Updated last year
- Rendering protein mutation movies from predicted 3D structures☆20Dec 7, 2023Updated 2 years ago
- ☆40Sep 17, 2024Updated last year
- Compressing protein structures effectively with torsion angles☆187Feb 10, 2026Updated 2 weeks ago
- ☆303Updated this week
- A Memetic Algorithm boosts accuracy and speed of all-atom protein-protein docking☆29Jul 5, 2025Updated 7 months ago
- Improved protein complex prediction with AlphaFold-multimer by denoising the MSA profile☆72Aug 26, 2024Updated last year
- scripts to find PBD structures for cancer driver proteins☆31Updated this week
- Differentiable Pairing using Alignment-based Language Models☆24Jan 5, 2024Updated 2 years ago
- Multiple Protein Structure Alignment at Scale with FoldMason☆252Jan 31, 2026Updated last month
- Making Protein Design accessible to all via Google Colab!☆886Dec 8, 2025Updated 2 months ago
- Transfer learning for Mutation Effect Prediction☆17Feb 13, 2024Updated 2 years ago
- Pocket to Concavity is a tool for refinement of Protein-Ligand binding site shape from alpha-spheres☆16Oct 2, 2024Updated last year
- ☆16Dec 10, 2024Updated last year
- Code, intermediate results and an interactive visualisation on prediction of putative novel enzymes and small molecule binding proteins p…☆27Aug 9, 2023Updated 2 years ago
- ☆21May 15, 2025Updated 9 months ago
- Versatile computational pipeline for processing protein structure data for deep learning applications.☆273Feb 14, 2024Updated 2 years ago
- ☆84Nov 25, 2025Updated 3 months ago
- This is the public repository for the RING PyMOL plugin developed by the BioComputing UP laboratory at the University of Padua☆30Sep 17, 2025Updated 5 months ago
- KIF - Key Interactions Finder. A python package to identify the key molecular interactions that regulate any conformational change.☆34Jan 6, 2026Updated last month
- ☆387Aug 7, 2024Updated last year
- Screen interactions with AlphaFold Multimer☆13Mar 10, 2025Updated 11 months ago
- Vector graphics cartoons from protein structure☆58Jun 22, 2022Updated 3 years ago
- Kuhlman Lab Installation of AlphaFold3☆39Sep 30, 2025Updated 4 months ago
- ☆74Feb 13, 2026Updated 2 weeks ago
- ☆33Oct 14, 2024Updated last year
- Graphical Representation of Ancestral Sequence Predictions☆12Mar 6, 2023Updated 2 years ago
- AlphaFold Meets Flow Matching for Generating Protein Ensembles☆515Oct 21, 2025Updated 4 months ago