Structure prediction of alternative protein conformations
☆86Feb 24, 2025Updated last year
Alternatives and similar repositories for Cfold
Users that are interested in Cfold are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Improved protein complex prediction with AlphaFold-multimer by denoising the MSA profile☆72Apr 13, 2026Updated 4 months ago
- Metrics to evaluate distributional coverage of generative models of protein structures.☆21Aug 13, 2025Updated last year
- Code for ColabDock paper☆157May 1, 2025Updated last year
- Modelling protein conformational landscape with Alphafold☆61Aug 29, 2025Updated last year
- A collection of tools that generate and analyse side-chain rotamer libraries☆10Updated this week
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- Protein-ligand structure prediction☆241Jul 31, 2025Updated last year
- Novel estimator for the change in stability upon point mutation in monomeric and multimeric proteins.☆66May 21, 2025Updated last year
- FASTDock: A Pipeline for Allosteric Drug Discovery - example scripts and jupyter notebook☆19Jun 10, 2023Updated 3 years ago
- ☆46Jan 10, 2024Updated 2 years ago
- PeptoneBench: evaluating protein ensembles across the order-disorder continuum☆22Mar 24, 2026Updated 5 months ago
- ☆72Feb 13, 2026Updated 6 months ago
- An open-source platform for developing protein models beyond AlphaFold.☆11Jul 15, 2025Updated last year
- ☆12Dec 2, 2024Updated last year
- Diffusion-based all-atom protein generative model.☆238Aug 27, 2025Updated last year
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- ☆24Nov 6, 2024Updated last year
- Explore protein fold space with deep generative models☆16Aug 5, 2024Updated 2 years ago
- Fast deep learning methods for large-scale protein-protein interaction screening☆135Aug 3, 2025Updated last year
- Sidechain conditioning and modeling for full-atom protein sequence design☆149Nov 11, 2025Updated 9 months ago
- ☆13May 24, 2026Updated 3 months ago
- Automated Adaptive Absolute alchemical Free Energy calculator☆124Jul 28, 2026Updated last month
- Flexible Protein-Protein Docking with a Multi-Track Iterative Transformer.☆102Jul 29, 2024Updated 2 years ago
- ☆152May 18, 2026Updated 3 months ago
- FoldFlow: SE(3)-Stochastic Flow Matching for Protein Backbone Generation☆299Dec 10, 2024Updated last year
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Automatic Retrieval and ClusTering of Interfaces in Complexes from 3D structural information☆33Jul 28, 2026Updated last month
- AlphaFold Meets Flow Matching for Generating Protein Ensembles☆543Mar 22, 2026Updated 5 months ago
- Data sharing for High-throughput Prediction of Changes in Protein Conformational Distributions with Subsampled AlphaFold2☆44May 15, 2024Updated 2 years ago
- Building more accurate protein structures from backbone torsion angles☆16Mar 21, 2025Updated last year
- SubPEx (Sub-Pocket Explorer) is a tool to enhance ensemble (multiple-receptor/relaxed-complex) virtual screening. It uses weighted ensemb…☆18Jun 30, 2025Updated last year
- ☆16Dec 10, 2024Updated last year
- Metadiffusion implemented in Boltz-2☆24Feb 23, 2026Updated 6 months ago
- Structure-conditioned masked language modeling for protein sequence design☆74Jan 31, 2024Updated 2 years ago
- Comprehensive benchmarking of protein-ligand structure prediction methods. (Nature Machine Intelligence)☆246Aug 10, 2026Updated 3 weeks ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- A Memetic Algorithm boosts accuracy and speed of all-atom protein-protein docking☆29Jul 5, 2025Updated last year
- Codes and scripts for "An artificial intelligence accelerated virtual screening platform for drug discovery"☆70Dec 16, 2024Updated last year
- Interface to OpenMM for easy setup of molecular dynamic simulations of protein-ligand complexes☆176May 22, 2026Updated 3 months ago
- ☆35Nov 22, 2023Updated 2 years ago
- Python tool for the discovery of similar 3D structural motifs across protein structures.☆36Nov 18, 2023Updated 2 years ago
- PENSA - a collection of python methods for exploratory analysis and comparison of biomolecular conformational ensembles.☆153Feb 12, 2025Updated last year
- Toolkit for alphafold3 input and output files☆107Jul 31, 2026Updated last month