Alternatives and similar repositories for Cfold:

Users that are interested in Cfold are comparing it to the libraries listed below

• GMdSilva / gms_natcomms_1705932980_data
  Data sharing for High-throughput Prediction of Changes in Protein Conformational Distributions with Subsampled AlphaFold2
  ☆38Updated 8 months ago
• KULL-Centre / _2024_cagiada_stability
  ☆60Updated last month
• data2code / afpdb
  Efficient manipulation of protein structures in Python
  ☆50Updated 2 months ago
• Kuhlman-Lab / evopro
  ☆72Updated 8 months ago
• LBM-EPFL / CARBonAra
  Deep learning framework for protein sequence design from a backbone scaffold that can leverage the molecular context including non-protei…
  ☆35Updated last month
• cddlab / alphafold3_tools
  Toolkit for alphafold3 input and output files
  ☆59Updated last month
• patrickbryant1 / AFProfile
  Improved protein complex prediction with AlphaFold-multimer by denoising the MSA profile
  ☆65Updated 4 months ago
• BioinfoMachineLearning / FlowDock
  Geometric Flow Matching for Generative Protein-Ligand Docking and Affinity Prediction (CASP16)
  ☆60Updated this week
• bene837 / af2seq
  ☆41Updated 4 months ago
• oxpig / AntiFold
  Improved antibody structure-based design using inverse folding
  ☆86Updated this week
• patrickbryant1 / MoLPC
  Modelling of Large Protein Complexes
  ☆37Updated 10 months ago
• AstraZeneca / DiffAbXL
  The official implementation of DiffAbXL benchmarked in the paper "Exploring Log-Likelihood Scores for Ranking Antibody Sequence Designs",…
  ☆63Updated 2 months ago
• gitter-lab / metl
  Mutational Effect Transfer Learning (METL) framework for pretraining and finetuning biophysics-informed protein language models
  ☆33Updated this week
• Graylab / GeoDock
  Flexible Protein-Protein Docking with a Multi-Track Iterative Transformer.
  ☆87Updated 5 months ago
• bwicky / oligomer_hallucination
  ☆36Updated last year
• dina-lab3D / CombFold
  ☆77Updated 3 months ago
• iambic-therapeutics / np-bench
  A benchmark for 3D biomolecular structure prediction models
  ☆52Updated last month
• clami66 / AF_unmasked
  Source code and examples for AlphaFold Unmasked
  ☆49Updated 3 weeks ago
• PeptoneLtd / proteinmpnn_ddg
  Novel estimator for the change in stability upon point mutation in monomeric and multimeric proteins.
  ☆39Updated last month
• dakpinaroglu / Frame2seq
  Structure-conditioned masked language modeling for protein sequence design
  ☆61Updated 11 months ago
• colbyford / PyMOLfold
  Plugin for folding sequences directly in PyMOL
  ☆69Updated this week
• jproney / AF2Rank
  ☆97Updated 2 years ago
• iamysk / AFsample2
  Modelling protein conformational landscape with Alphafold
  ☆37Updated last week
• amyxlu / plaid
  Multimodal generation of protein sequence and all-atom structure using latent diffusion, with compositional function and taxonomic prompt…
  ☆61Updated 3 weeks ago
• molecularmodelinglab / plantain
  Fast and accurate molecular docking with an AI pose scoring function
  ☆37Updated 11 months ago
• ELELAB / RosettaDDGPrediction
  ☆56Updated last month
• LPDI-EPFL / masif-neosurf
  MaSIF-neosurf: surface-based protein design for ternary complexes.
  ☆53Updated this week
• KULL-Centre / _2023_Tesei_IDRome
  ☆36Updated last month
• compsciencelab / mdCATH
  This repository houses all the scripts and notebooks utilized for generating, analyzing, and validating the mdCATH dataset. Some user ex…
  ☆31Updated last month
• tiwarylab / GrASP
  Graph Attention Site Prediction (GrASP): Identifying Druggable Binding Sites Using Graph Neural Networks with Attention
  ☆49Updated 2 months ago