wallnerlab / AFsample2Links
Modelling protein conformational landscape with Alphafold
☆54Updated 3 months ago
Alternatives and similar repositories for AFsample2
Users that are interested in AFsample2 are comparing it to the libraries listed below
Sorting:
- Data sharing for High-throughput Prediction of Changes in Protein Conformational Distributions with Subsampled AlphaFold2☆42Updated last year
- ☆52Updated 3 weeks ago
- code for SeqDance/ESMDance, biophysics-informed protein language models☆41Updated 8 months ago
- ☆37Updated 2 years ago
- Extension of ThermoMPNN for double mutant predictions☆49Updated 2 months ago
- Scores for Hydrophobicity and Charges based on SASAs☆40Updated 6 months ago
- Automatic Retrieval and ClusTering of Interfaces in Complexes from 3D structural information☆32Updated 2 weeks ago
- ☆46Updated last year
- Novel estimator for the change in stability upon point mutation in monomeric and multimeric proteins.☆57Updated 6 months ago
- ProtFlow Implementation of the RiffDiff pipeline to design enzymes from theozymes.☆60Updated 2 weeks ago
- All-Atom (Including Hydrogen!) Ligand-Conditioned Protein Sequence Design & Sidechain Packing Model☆25Updated last week
- Fold Conditioned protein design pipeline based on AF2Multimer Hallucination☆46Updated 2 weeks ago
- Explicit crosslinks in AlphaFold 3☆23Updated 9 months ago
- ☆71Updated 9 months ago
- Making Protein folding accessible to all!☆25Updated last year
- Boltzmann-ranked alternative protein conformations from reduced-MSA AlphaFold2☆59Updated 3 weeks ago
- Physics-Guided All-Atom Diffusion Model for Accurate Protein-Ligand Complex Prediction☆84Updated 2 months ago
- Protein design and sculpting using Rosetta and Deep learning methods (RFDiff and Alphafold2)☆44Updated 3 months ago
- Updated Protpardelle models with more robust motif scaffolding and multichain support☆53Updated this week
- Structure prediction and design of proteins with noncanonical amino acids☆112Updated 2 weeks ago
- bakerlab pymol scripts☆25Updated 5 years ago
- Code for running BinderFlow☆53Updated 3 weeks ago
- Efficient manipulation of protein structures in Python☆60Updated 2 months ago
- Binding pocket optimization based on force fields and docking scoring functions☆37Updated 9 months ago
- GRACE: Generative Renaissance in Artificial Computational Enzyme Design☆19Updated 11 months ago
- Controlling the usage of hydrophobic residues on AfDesign for binder peptide design with AlphaFold hallucination protocol☆33Updated 2 years ago
- scripts to find PBD structures for cancer driver proteins☆31Updated last week
- Python package for the analysis of natural and modified peptides using a set of modules to study their sequences☆43Updated 3 weeks ago
- Deep learning framework for protein sequence design from a backbone scaffold that can leverage the molecular context including non-protei…☆46Updated last month
- Guiding diffusion models for antibody sequence and structure co-design with developability properties.☆35Updated last year