wallnerlab / AFsample2Links
Modelling protein conformational landscape with Alphafold
☆53Updated 3 weeks ago
Alternatives and similar repositories for AFsample2
Users that are interested in AFsample2 are comparing it to the libraries listed below
Sorting:
- Data sharing for High-throughput Prediction of Changes in Protein Conformational Distributions with Subsampled AlphaFold2☆39Updated last year
- ☆49Updated 2 months ago
- Extension of ThermoMPNN for double mutant predictions☆43Updated last month
- Structure prediction and design of proteins with noncanonical amino acids☆99Updated last week
- Physics-Guided All-Atom Diffusion Model for Accurate Protein-Ligand Complex Prediction☆77Updated last month
- Boltzmann-ranked alternative protein conformations from reduced-MSA AlphaFold2☆58Updated last month
- Novel estimator for the change in stability upon point mutation in monomeric and multimeric proteins.☆53Updated 4 months ago
- code for SeqDance/ESMDance, biophysics-informed protein language models☆40Updated 5 months ago
- Scores for Hydrophobicity and Charges based on SASAs☆37Updated 3 months ago
- ☆34Updated 2 years ago
- ☆44Updated last year
- ProtFlow Implementation of the RiffDiff pipeline to design enzymes from theozymes.☆34Updated last week
- A Score-Only Adaptation of AlphaFold3 for Biomolecular Structure Evaluation☆71Updated last month
- Making Protein folding accessible to all!☆24Updated last year
- ☆35Updated 5 months ago
- ☆71Updated 6 months ago
- ☆55Updated 2 months ago
- Efficient manipulation of protein structures in Python☆57Updated last week
- Deep learning framework for protein sequence design from a backbone scaffold that can leverage the molecular context including non-protei…☆45Updated 10 months ago
- Binding pocket optimization based on force fields and docking scoring functions☆34Updated 6 months ago
- Protein design and sculpting using Rosetta and Deep learning methods (RFDiff and Alphafold2)☆38Updated 3 weeks ago
- Automatic Retrieval and ClusTering of Interfaces in Complexes from 3D structural information☆31Updated last month
- Official repository of GENzyme☆53Updated 9 months ago
- Updated Protpardelle models with more robust motif scaffolding and multichain support☆34Updated this week
- ☆46Updated 6 months ago
- Explicit crosslinks in AlphaFold 3☆22Updated 6 months ago
- ProteinDesign with RFdiffusion and ProteinMPNN/LigandMPNN☆21Updated 6 months ago
- scripts to find PBD structures for cancer driver proteins☆31Updated 7 months ago
- A Motif Hash Based Method for Matching Crosslinkers into Peptides and Proteins☆23Updated last year
- Python package for the analysis of natural and modified peptides using a set of modules to study their sequences☆38Updated last week