Alternatives and similar repositories for AlphaFastPPi

Users that are interested in AlphaFastPPi are comparing it to the libraries listed below

• PDB-REDO / AlphaBridge
  ☆50Updated last month
• steineggerlab / colabfold-protocol
  ColabFold protocol
  ☆56Updated last year
• patrickbryant1 / SpeedPPI
  Rapid protein-protein interaction network creation from multiple sequence alignments with Deep Learning
  ☆90Updated last year
• SNU-CSSB / RF2-Lite
  ☆33Updated last year
• jlparkI / AntPack
  Tools for annotation, processing and ML for antibody sequences
  ☆39Updated this week
• KULL-Centre / _2022_ML-ddG-Blaabjerg
  ☆56Updated 5 months ago
• minmarg / gtalign_alpha
  GTalign, high-performance protein structure alignment, superposition and search
  ☆54Updated 5 months ago
• JudeWells / chainsaw
  ☆47Updated last year
• CongLabCode / RoseTTAFold2-PPI
  Fast deep learning methods for large-scale protein-protein interaction screening
  ☆117Updated 6 months ago
• gwlilabmit / FragFold
  Fragment binding prediction with ColabFold
  ☆41Updated 2 months ago
• jtrinquier / SoftAlign
  ☆32Updated 3 weeks ago
• VarunUllanat / mint
  Learning the language of protein-protein interactions
  ☆127Updated 3 weeks ago
• Shunsuke-1994 / rfamgen
  Code repository of "Deep generative design of RNA family sequences"
  ☆40Updated 2 months ago
• brennanaba / ImmuneBuilder
  Predict the structure of immune receptor proteins
  ☆59Updated last year
• psipred / s4pred
  A tool for accurate prediction of a protein's secondary structure from only it's amino acid sequence
  ☆63Updated 10 months ago
• piercelab / tcrmodel2
  ☆45Updated 10 months ago
• DeepRank / DeepRank-GNN-esm
  Graph Network for protein-protein interface including language model features
  ☆34Updated last year
• churchlab / low-N-protein-engineering
  Code and data to reproduce analyses in Biswas et al. (2020) "Low-N protein engineering with data-efficient deep learning".
  ☆60Updated 4 years ago
• ELELAB / mutatex
  scripts and facilities for in-silico mutagenesis with FoldX
  ☆66Updated last month
• CongLabCode / DPAM
  A domain parser for Alphafold models
  ☆46Updated 2 years ago
• chayan7 / flashfold
  A tool for protein and protein complex structure prediction.
  ☆29Updated 7 months ago
• Doudna-lab / GARNET_DL
  ☆36Updated last year
• steineggerlab / folddisco
  Fast indexing and search of discontinuous motifs in protein structures
  ☆113Updated this week
• sacdallago / biotrainer
  Biological prediction models made simple.
  ☆48Updated 3 weeks ago
• AIforGreatGood / biotransfer
  Machine learning-driven antibody design
  ☆63Updated 2 years ago
• labstructbioinf / pLM-BLAST
  Detection of remote homology by comparison of protein language model representations
  ☆61Updated last year
• tymor22 / protein-vec
  Repository for Protein-Vec, a protein embedding mixture of experts model
  ☆38Updated 2 years ago
• psipred / Merizo
  Fast and accurate protein domain segmentation using Invariant Point Attention
  ☆46Updated 8 months ago
• timkartar / DeepPBS
  Geometric deep learning of protein–DNA binding specificity
  ☆76Updated 10 months ago
• adaptyvbio / competition_metrics
  Metrics for our protein design competitions.
  ☆35Updated last year