Fast AlphaFold-Multimer based pipeline for Protein-Protein Interaction (PPI) screening
☆40Sep 27, 2024Updated last year
Alternatives and similar repositories for AlphaFastPPi
Users that are interested in AlphaFastPPi are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Clusters protein chains based on CA distance difference☆18Updated this week
- Explicit crosslinks in AlphaFold 3☆23Mar 17, 2025Updated last year
- Explore protein fold space with deep generative models☆16Aug 5, 2024Updated last year
- ☆312Updated this week
- GO2Sum is a deep learning based summarizer that generates human-readable summaries for GO term annotations made by protein function predi…☆16Mar 27, 2024Updated 2 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- ☆16Oct 3, 2023Updated 2 years ago
- ☆18Feb 20, 2026Updated 3 months ago
- Fast protein structure searching or your money back☆119Apr 13, 2026Updated last month
- Baseline model for PPB-Affinity benchmark data☆39May 21, 2025Updated last year
- AlphaFind: Discover structure similarity across the entire known proteome☆26Apr 14, 2026Updated last month
- ☆17Feb 27, 2026Updated 3 months ago
- A tool for 2D protein visualization aimed at improving the comparability of protein structures through standardized 2D visualizations.☆23Mar 13, 2026Updated 2 months ago
- PanEffect is a JavaScript framework to explore variant effects across a pangenome. The tool has two views that allows a user to (1) expl…☆13Jan 30, 2024Updated 2 years ago
- A domain parser for Alphafold models☆48Dec 12, 2023Updated 2 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- ☆12May 3, 2025Updated last year
- Toolkit for alphafold3 input and output files☆104Updated this week
- Weighted Ensemble Data Analysis and Plotting☆27Dec 11, 2025Updated 5 months ago
- Template-based protein design with Raygun☆81Apr 12, 2026Updated last month
- P2DFlow: A Protein Ensemble Generative Model with SE(3) Flow Matching☆44May 22, 2025Updated last year
- Utility scripts to generate and evaluate parametrically guided beta barrel protein backbone structures.☆13Nov 14, 2025Updated 6 months ago
- A Light-Weight And Interpretable Molecular Docking Model☆26Oct 23, 2024Updated last year
- GTalign, high-performance macromolecular structure alignment, superposition and search☆57May 21, 2026Updated 2 weeks ago
- Protein structure diffusion model for unconditional protein generation and motif scaffolding☆192Jun 24, 2024Updated last year
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- HyperMPNN ‒ A general strategy to design thermostable proteins learned from hyperthermophiles☆74Jul 2, 2025Updated 11 months ago
- Python rich client for visual protein Sequence to Structure Analysis☆20Mar 31, 2026Updated 2 months ago
- ☆23Apr 8, 2026Updated 2 months ago
- Official repo for paper "AlphaFold-Multimer accurately captures interactions and dynamics of intrinsically disordered protein regions"☆17Dec 8, 2024Updated last year
- ML toolset for creating TED: The Encyclopedia of Domains☆28May 29, 2025Updated last year
- ☆47Sep 16, 2024Updated last year
- ☆92Sep 25, 2024Updated last year
- Public version for Distance-AF☆32Aug 17, 2025Updated 9 months ago
- Official open-source of Accurate structure prediction of immune proteins using parameter-efficient transfer learning☆24Mar 19, 2025Updated last year
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- ☆56Mar 12, 2026Updated 2 months ago
- Pytorch implementation for ICML 2024 paper Proteus: Exploring Protein Structure Generation for Enhanced Designability and Efficiency.☆90Jun 23, 2024Updated last year
- Multiple Protein Structure Alignment at Scale with FoldMason☆278May 11, 2026Updated 3 weeks ago
- Source code and examples for AlphaFold Unmasked☆78Nov 25, 2025Updated 6 months ago
- No description yet.☆17Aug 8, 2024Updated last year
- ☆64May 13, 2026Updated 3 weeks ago
- Features Based Conformational Clustering of MD trajectories. See details at:☆10Nov 20, 2025Updated 6 months ago