Alternatives and similar repositories for AlphaFastPPi

Users that are interested in AlphaFastPPi are comparing it to the libraries listed below

• PDB-REDO / AlphaBridge
  ☆45Updated last week
• patrickbryant1 / SpeedPPI
  Rapid protein-protein interaction network creation from multiple sequence alignments with Deep Learning
  ☆90Updated last year
• steineggerlab / colabfold-protocol
  ColabFold protocol
  ☆57Updated last year
• jlparkI / AntPack
  Tools for annotation, processing and ML for antibody sequences
  ☆33Updated this week
• chayan7 / flashfold
  A tool for protein and protein complex structure prediction.
  ☆29Updated 5 months ago
• gwlilabmit / FragFold
  Fragment binding prediction with ColabFold
  ☆37Updated last week
• piercelab / tcrmodel2
  ☆45Updated 7 months ago
• KULL-Centre / _2022_ML-ddG-Blaabjerg
  ☆54Updated 3 months ago
• CongLabCode / RoseTTAFold2-PPI
  Fast deep learning methods for large-scale protein-protein interaction screening
  ☆95Updated 3 months ago
• VarunUllanat / mint
  Learning the language of protein-protein interactions
  ☆102Updated last month
• minmarg / gtalign_alpha
  GTalign, high-performance protein structure alignment, superposition and search
  ☆51Updated 2 months ago
• Shunsuke-1994 / rfamgen
  Code repository of "Deep generative design of RNA family sequences"
  ☆38Updated this week
• brennanaba / ImmuneBuilder
  Predict the structure of immune receptor proteins
  ☆57Updated last year
• ELELAB / mutatex
  scripts and facilities for in-silico mutagenesis with FoldX
  ☆61Updated 4 months ago
• psipred / s4pred
  A tool for accurate prediction of a protein's secondary structure from only it's amino acid sequence
  ☆60Updated 7 months ago
• AIforGreatGood / biotransfer
  Machine learning-driven antibody design
  ☆60Updated 2 years ago
• CongLabCode / DPAM
  A domain parser for Alphafold models
  ☆42Updated last year
• Doudna-lab / GARNET_DL
  ☆36Updated 10 months ago
• AbSciBio / igdesign
  ☆47Updated 10 months ago
• DeepRank / DeepRank-GNN-esm
  Graph Network for protein-protein interface including language model features
  ☆33Updated last year
• churchlab / low-N-protein-engineering
  Code and data to reproduce analyses in Biswas et al. (2020) "Low-N protein engineering with data-efficient deep learning".
  ☆59Updated 4 years ago
• ncbi / SSDraw
  ☆84Updated 2 weeks ago
• pgmikhael / protgps
  ☆96Updated 5 months ago
• PDB-REDO / alphafill
  AlphaFill is an algorithm based on sequence and structure similarity that “transplants” missing compounds to the AlphaFold models. By add…
  ☆108Updated last month
• JudeWells / chainsaw
  ☆44Updated last year
• csi-greifflab / manuscript_insilico_antibody_generation
  ☆23Updated 4 years ago
• flyark / AFM-LIS
  Local Interaction Score (LIS) Calculation from AlphaFold-Multimer (Enhanced Protein-Protein Interaction Discovery via AlphaFold-Multimer)…
  ☆60Updated 2 weeks ago
• haddocking / haddock-tools
  Set of useful HADDOCK utility scripts
  ☆55Updated last month
• adaptyvbio / competition_metrics
  Metrics for our protein design competitions.
  ☆35Updated last year
• Qrouger / PPIFold
  ☆22Updated 3 weeks ago