☆92Sep 25, 2024Updated last year
Alternatives and similar repositories for CombFold
Users that are interested in CombFold are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Predict multiple protein conformations using sequence clustering and AlphaFold2.☆187Oct 7, 2025Updated 8 months ago
- AlphaLink2: Integrating crosslinking MS data into Uni-Fold-Multimer☆68Aug 26, 2025Updated 9 months ago
- Improved protein complex prediction with AlphaFold-multimer by denoising the MSA profile☆72Apr 13, 2026Updated last month
- Automatic atomic model building program for cryo-EM maps☆171May 18, 2026Updated 3 weeks ago
- Source code and examples for AlphaFold Unmasked☆78Nov 25, 2025Updated 6 months ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- ☆74Feb 13, 2026Updated 3 months ago
- From cryo-EM density map to atomic structure☆31Aug 17, 2025Updated 9 months ago
- AlphaFold-initiated replica exchange protein docking☆92Jun 5, 2025Updated last year
- Data sharing for High-throughput Prediction of Changes in Protein Conformational Distributions with Subsampled AlphaFold2☆43May 15, 2024Updated 2 years ago
- Code for ColabDock paper☆156May 1, 2025Updated last year
- NeuralPLexer: State-specific protein-ligand complex structure prediction with a multi-scale deep generative model☆330Oct 6, 2025Updated 8 months ago
- ☆212Apr 21, 2025Updated last year
- Joint sequence and structure generation with RoseTTAFold sequence space diffusion☆333Oct 28, 2024Updated last year
- AlphaFold Meets Flow Matching for Generating Protein Ensembles☆528Mar 22, 2026Updated 2 months ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- DockQ is a single continuous quality measure for Protein, Nucleic Acids and Small Molecule Docking Models☆400Feb 26, 2026Updated 3 months ago
- ☆312Jun 5, 2026Updated last week
- Sidechain conditioning and modeling for full-atom protein sequence design☆139Nov 11, 2025Updated 7 months ago
- Protein-ligand structure prediction☆240Jul 31, 2025Updated 10 months ago
- Explicit crosslinks in AlphaFold 3☆23Mar 17, 2025Updated last year
- Fast protein structure searching or your money back☆119Apr 13, 2026Updated last month
- Geometric deep learning method to predict protein binding interfaces from a protein structure.☆161Oct 11, 2023Updated 2 years ago
- Protein hallucination and inpainting with RoseTTAFold☆282Mar 30, 2023Updated 3 years ago
- Toolkit for alphafold3 input and output files☆104Jun 5, 2026Updated last week
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Build conformational representations of Intrinsically Disordered Proteins and Regions by a guided sampling of the protein torsion space☆33Dec 18, 2025Updated 5 months ago
- Public RFDiffusionAA repo☆482Jul 9, 2024Updated last year
- A program interfacing Segment Anything with cryoSPARC via cryosparc-tools to efficiently identify vesicle-embedded membrane proteins and …☆13Feb 18, 2025Updated last year
- scripts to find PBD structures for cancer driver proteins☆31Feb 27, 2026Updated 3 months ago
- Predicting direct protein-protein interactions with AlphaFold deep learning neural network models.☆173Sep 8, 2024Updated last year
- ☆118Dec 7, 2022Updated 3 years ago
- A protein structure dataset that combines 3D atomic coordinates with biophysical and evolutionary properties for every atom in every "cle…☆38Jul 25, 2024Updated last year
- Improved antibody structure-based design using inverse folding☆164Dec 9, 2025Updated 6 months ago
- ☆26May 19, 2026Updated 3 weeks ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- RoseTTAFold2 protein/nucleic acid complex prediction☆380Jun 3, 2024Updated 2 years ago
- ☆34Mar 2, 2026Updated 3 months ago
- Diffusion-based all-atom protein generative model.☆236Aug 27, 2025Updated 9 months ago
- Compressing protein structures effectively with torsion angles☆194Feb 10, 2026Updated 4 months ago
- Structure-conditioned masked language modeling for protein sequence design☆74Jan 31, 2024Updated 2 years ago
- ☆810May 18, 2026Updated 3 weeks ago
- Making Protein Design accessible to all via Google Colab!☆915Apr 6, 2026Updated 2 months ago