A toolkit developed to predict and analyze PROTAC-mediated ternary complexes using AlphaFold3 and Boltz-1.
☆44Jul 17, 2025Updated last year
Alternatives and similar repositories for PROTACFold
Users that are interested in PROTACFold are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- PROTAC-Splitter is a machine learning framework designed for automated annotation of PROTAC substructures.☆29Jul 20, 2026Updated last month
- ☆28Oct 31, 2022Updated 3 years ago
- ☆54Nov 29, 2025Updated 9 months ago
- Cloud GPU supported NAMD3-based binding free energy difference between two small molecules against the same protein target. This is prob…☆28Aug 7, 2026Updated 3 weeks ago
- Predicting PROTAC protein degradation activity via machine learning.☆17Sep 17, 2025Updated 11 months ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- ☆18Nov 17, 2025Updated 9 months ago
- ☆28Jul 3, 2024Updated 2 years ago
- Boltzina: Efficient and Accurate Virtual Screening via Docking-Guided Binding Prediction with Boltz-2☆100May 16, 2026Updated 3 months ago
- ☆40Jun 10, 2025Updated last year
- InteractionDrawer is a JavaScript library for the drawing of highly interactive 2D ligand interaction diagrams.☆29Oct 16, 2023Updated 2 years ago
- ☆60May 9, 2025Updated last year
- Efficient Sampling of PROTAC-Induced Ternary Complexes☆19Jun 3, 2025Updated last year
- ☆20Dec 2, 2025Updated 9 months ago
- ☆33Feb 27, 2026Updated 6 months ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- Automatic Fragment Linking with Deep Conditional Transformer Neural Networks☆55Feb 27, 2022Updated 4 years ago
- deCIFer is a transformer-based model for crystal structure prediction, generating Crystallographic Information Files (CIFs) directly from…☆16Aug 3, 2026Updated last month
- Integrative modeling of PROTAC-mediated ternary complex☆36May 4, 2022Updated 4 years ago
- SubPEx (Sub-Pocket Explorer) is a tool to enhance ensemble (multiple-receptor/relaxed-complex) virtual screening. It uses weighted ensemb…☆18Jun 30, 2025Updated last year
- ☆26Jul 14, 2024Updated 2 years ago
- Lightweight induced fit docking☆22May 22, 2023Updated 3 years ago
- EvolveX, a de novo antibody computational design pipeline.☆24Sep 18, 2025Updated 11 months ago
- Toolkit for alphafold3 input and output files☆107Updated this week
- DualBind is a 3D structure-based deep learning model with a dual-loss framework for accurate and fast protein-ligand binding affinity pre…☆25Oct 21, 2025Updated 10 months ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- ☆17Sep 26, 2025Updated 11 months ago
- The code was developed for training diverse ML and DL models to predict PROTACs degradation. Data cleaning for two public datasets, PROTA…☆17Oct 31, 2023Updated 2 years ago
- ☆20Jul 14, 2022Updated 4 years ago
- PROTACable is an end-to-end in-silico design toolkit for novel PROTACs☆31Jun 3, 2024Updated 2 years ago
- ☆22Apr 9, 2024Updated 2 years ago
- ☆15Aug 8, 2025Updated last year
- ☆13Jun 7, 2024Updated 2 years ago
- ☆19Jun 27, 2024Updated 2 years ago
- ☆67Mar 14, 2023Updated 3 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- A web-based novel drug design platform for up-to-date bioisosteric replacement☆30May 13, 2026Updated 3 months ago
- This script is designed for evaluating the binding affinity between a protein target and a small molecule, by calculating the binding fre…☆15May 1, 2023Updated 3 years ago
- PharmaMind® is an innovative drug discovery platform that integrates advanced artificial intelligence and computational simulation design…☆26Sep 15, 2022Updated 3 years ago
- ☆13Dec 29, 2022Updated 3 years ago
- Knowledge-Guided Diffusion Model for 3D Ligand-Pharmacophore Mapping☆51Jun 5, 2026Updated 2 months ago
- OpenMM-based framework for absolute and relative binding free energy calculations with the Alchemical Transfer Method☆175Aug 18, 2026Updated 2 weeks ago
- ☆101Feb 24, 2025Updated last year