HWaymentSteele / AF_ClusterLinks
Predict multiple protein conformations using sequence clustering and AlphaFold2.
☆165Updated last month
Alternatives and similar repositories for AF_Cluster
Users that are interested in AF_Cluster are comparing it to the libraries listed below
Sorting:
- Code for ColabDock paper☆148Updated 7 months ago
- ☆141Updated 4 months ago
- Protein folding in Pymol☆127Updated last week
- A compilation of deep learning methods for protein design☆97Updated 3 years ago
- ☆225Updated 3 months ago
- Tutorials, cheat sheets, and other resources for computational methods for protein design.☆123Updated 2 years ago
- GNN trained to predict changes in thermodynamic stability for protein point mutants☆211Updated 3 months ago
- Scoring function for interprotein interactions in AlphaFold2 and AlphaFold3☆162Updated 8 months ago
- Protein-ligand structure prediction☆235Updated 4 months ago
- Predict the structure of immune receptor proteins☆166Updated 3 weeks ago
- ☆132Updated 3 years ago
- Masif seed paper repository☆165Updated 2 months ago
- Geometric deep learning method to predict protein binding interfaces from a protein structure.☆150Updated 2 years ago
- MaSIF-neosurf: surface-based protein design for ternary complexes.☆156Updated 3 weeks ago
- In silico directed evolution of peptide binders with AlphaFold☆247Updated 2 weeks ago
- A series of scripts that facilitate the prediction of protein structures in multiple conformations using AlphaFold2☆98Updated 2 years ago
- AlphaFold-initiated replica exchange protein docking☆85Updated 6 months ago
- Official repo of the modular BioExcel version of HADDOCK☆207Updated last week
- Plugin for folding sequences directly in PyMOL☆107Updated 4 months ago
- ☆116Updated last year
- ☆135Updated 5 months ago
- ☆114Updated 3 years ago
- Python code for fine-tuning AlphaFold to perform protein-peptide binding predictions☆166Updated last year
- ☆128Updated 6 months ago
- ☆118Updated 5 months ago
- A bunch of shell utilities for dealing the silent files☆71Updated 2 months ago
- Improved antibody structure-based design using inverse folding☆144Updated 3 months ago
- Machine Learning models for in vitro enzyme kinetic parameter prediction☆64Updated 7 months ago
- ☆92Updated last month
- A machine-learning package for navigating combinatorial protein fitness landscapes.☆129Updated 4 years ago