ullahsamee / PyMOLfold
Plugin for folding sequences directly in PyMOL
☆26Updated 2 months ago
Alternatives and similar repositories for PyMOLfold:
Users that are interested in PyMOLfold are comparing it to the libraries listed below
- ☆49Updated 8 months ago
- Efficient manipulation of protein structures in Python☆51Updated 3 months ago
- A Memetic Algorithm boosts accuracy and speed of all-atom protein-protein docking☆26Updated 10 months ago
- ☆72Updated this week
- PyDock Tutorial☆30Updated 6 years ago
- Structure-based self-supervised learning enables ultrafast prediction of stability changes upon mutations☆38Updated last week
- Exploring the conformational ensembles of protein-protein complexes with transformer-based generative neural networks☆27Updated 8 months ago
- Bioinformatics and Cheminformatics protocols for peptide analysis☆38Updated 2 years ago
- ☆61Updated 2 months ago
- ☆41Updated 5 months ago
- Deep learning framework for protein sequence design from a backbone scaffold that can leverage the molecular context including non-protei…☆36Updated 2 months ago
- Modelling of Large Protein Complexes☆37Updated 11 months ago
- ☆38Updated last year
- PepFun 2.0: improved protocols for the analysis of natural and modified peptides☆21Updated last year
- Toolkit for alphafold3 input and output files☆62Updated 3 weeks ago
- DiffDock implementation that adds support for HPC execution using Slurm and Singularity☆25Updated 4 months ago
- Explicit crosslinks in AlphaFold 3☆15Updated this week
- Active Learning-Assisted Directed Evolution for Protein Engineering☆35Updated 2 months ago
- Source code and examples for AlphaFold Unmasked☆56Updated 2 months ago
- Data sharing for High-throughput Prediction of Changes in Protein Conformational Distributions with Subsampled AlphaFold2☆38Updated 9 months ago
- Python tool for the discovery of similar 3D structural motifs across protein structures.☆26Updated last year
- This is the public repository for the RING PyMOL plugin developed by the BioComputing UP laboratory at the University of Padua☆23Updated 2 weeks ago
- Structure prediction of alternative protein conformations☆74Updated 5 months ago
- Automatic gromacs protocol from preparation to production with ligand parametrization through☆59Updated 4 months ago
- A bundle of deep-learning packages for biomolecular structure prediction and design contributed to the Rosetta Commons☆34Updated 2 years ago
- AlphaFold-initiated replica exchange protein docking☆69Updated 6 months ago
- Scores for Hydrophobicity and Charges based on SASAs☆29Updated 2 weeks ago
- A domain parser for Alphafold models☆34Updated last year
- Analysis of alphafold and colabfold results☆14Updated last week