☆59Aug 19, 2026Updated last week
Alternatives and similar repositories for AlphaBridge
Users that are interested in AlphaBridge are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Official repo for paper "AlphaFold-Multimer accurately captures interactions and dynamics of intrinsically disordered protein regions"☆17Dec 8, 2024Updated last year
- DFMDock (Denoising Force Matching Dock), a diffusion model that unifies sampling and ranking within a single framework.☆56Jul 22, 2025Updated last year
- Fast deep learning methods for large-scale protein-protein interaction screening☆135Aug 3, 2025Updated last year
- A convinent tool to visualize AlphaFold 3 prediction results with PyMOL and matplotlib☆19May 20, 2024Updated 2 years ago
- ☆26Feb 4, 2025Updated last year
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Toolkit for alphafold3 input and output files☆107Jul 31, 2026Updated 3 weeks ago
- HalluDesign, a hallucination-driven all-atom framework for the iterative co-optimization and co-design of protein sequences and structure…☆87Jul 23, 2026Updated last month
- Local Interaction Score (LIS) for structure prediction analysis☆85Jul 28, 2026Updated last month
- ☆31Aug 8, 2025Updated last year
- ☆54Apr 23, 2026Updated 4 months ago
- ☆33Jun 1, 2024Updated 2 years ago
- ☆16Sep 29, 2025Updated 11 months ago
- Fast AlphaFold-Multimer based pipeline for Protein-Protein Interaction (PPI) screening☆42Sep 27, 2024Updated last year
- ☆13Updated this week
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- AlphaFast: ultra-high-throughput AlphaFold3 inference with MMSeqs2-GPU☆166May 4, 2026Updated 3 months ago
- ☆33Mar 2, 2026Updated 5 months ago
- Neural Iterative Selection-Expansion using LigandMPNN/LASErMPNN and Boltz-2x☆65Aug 11, 2026Updated 2 weeks ago
- Utility scripts to generate and evaluate parametrically guided beta barrel protein backbone structures.☆13Nov 14, 2025Updated 9 months ago
- ☆259Feb 12, 2026Updated 6 months ago
- ☆51Jun 15, 2026Updated 2 months ago
- Structure prediction and design of proteins with noncanonical amino acids☆146Feb 1, 2026Updated 6 months ago
- Scoring function for interprotein interactions in AlphaFold2 and AlphaFold3☆261Jan 3, 2026Updated 7 months ago
- ☆92Sep 25, 2024Updated last year
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- [ICML 2024] Floating Anchor Diffusion Model for Multi-motif Scaffolding☆34Aug 23, 2024Updated 2 years ago
- Fast indexing and search of discontinuous motifs in protein structures☆213Jul 10, 2026Updated last month
- Predict multiple protein conformations using sequence clustering and AlphaFold2.☆190Oct 7, 2025Updated 10 months ago
- OVO, an open-source ecosystem for de novo protein design☆142Jul 13, 2026Updated last month
- ☆16Dec 10, 2024Updated last year
- ☆18May 11, 2026Updated 3 months ago
- A Unified Evaluation Suite for Protein Design☆137Jan 27, 2026Updated 7 months ago
- SwitchCraft: A Programmatic Framework for Designing State-Switching Proteins☆89Jun 1, 2026Updated 2 months ago
- Template-based protein design with Raygun☆148Jul 30, 2026Updated last month
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- This is a python script that allows for batch processing of AlphaFold3 output files☆17Oct 13, 2024Updated last year
- FeNNol Pretrained Models Collection☆22Dec 17, 2025Updated 8 months ago
- Analysis of alphafold and colabfold results☆50May 22, 2026Updated 3 months ago
- Alchemical Free Energy Calculations with Grand Canonical Ensemble☆20May 2, 2026Updated 3 months ago
- A modular and user-friendly Python framework for protein and ligand engineering workflows on SLURM clusters☆104Jul 28, 2026Updated last month
- ☆86Mar 23, 2026Updated 5 months ago
- Code for running BinderFlow☆66Jun 22, 2026Updated 2 months ago