PDB-REDO / AlphaBridge

Related projects ⓘ

Alternatives and complementary repositories for AlphaBridge

• CongLabCode / RoseTTAFold2-PPI
  Fast deep learning methods for large-scale protein-protein interaction screening
  ☆24Updated last month
• swanss / FragFold
  ☆17Updated last week
• MIDIfactory / AlphaFastPPi
  Fast AlphaFold-Multimer based pipeline for Protein-Protein Interaction (PPI) screening
  ☆30Updated last month
• mat10d / EvolvePro
  This is the offical codebase to reproduce and use EVOLVEpro, a model for in silico directed evolution of protein activities using few-sho…
  ☆22Updated last week
• coreyhowe999 / RSO
  ☆17Updated 3 weeks ago
• brennanaba / ImmuneBuilder
  Predict the structure of immune receptor proteins
  ☆47Updated last week
• jurgjn / af-protein-universe
  ☆21Updated last year
• KULL-Centre / _2022_functional-sites-cagiada
  ☆20Updated last year
• rohitsinghlab / raygun
  Template-based protein design with Raygun
  ☆44Updated 2 weeks ago
• steineggerlab / colabfold-protocol
  ColabFold protocol
  ☆44Updated last month
• DeepRank / DeepRank-GNN-esm
  Graph Network for protein-protein interface including language model features
  ☆25Updated 7 months ago
• alirezaomidi / AFM-IDR
  Official repo for paper "AlphaFold-Multimer accurately captures interactions and dynamics of intrinsically disordered protein regions"
  ☆13Updated this week
• wrf / pdbcolor
  Python code to color a PDB structure based on parameters from a multiple sequence alignment
  ☆32Updated last year
• data2code / afpdb
  Efficient manipulation of protein structures in Python
  ☆39Updated 2 weeks ago
• hgbrian / biocolabs
  a collection of colabs useful for molecular biology
  ☆27Updated 8 months ago
• TattaBio / OMG
  ☆27Updated 3 months ago
• KULL-Centre / _2024_cagiada_stability
  ☆45Updated 3 weeks ago
• the-protein-engineering-tournament / pet-pilot-2023
  Results and data from the pilot round of the Protein Engineering Tournament
  ☆22Updated this week
• proteinphysiologylab / frustratometeR
  ☆33Updated last month
• seanrjohnson / protein_scoring
  Generating and scoring novel enzyme sequences with a variety of models and metrics
  ☆62Updated 4 months ago
• AIforGreatGood / biotransfer
  Machine learning-driven antibody design
  ☆51Updated last year
• jlparkI / AntPack
  Tools for annotation, processing and ML for antibody sequences
  ☆20Updated 2 weeks ago
• SNU-CSSB / RF2-Lite
  ☆21Updated 5 months ago
• eva-smorodina / antibody_developability
  ☆9Updated last year
• kWeissenow / MutAmore
  Rendering protein mutation movies from predicted 3D structures
  ☆20Updated 11 months ago
• CongLabCode / DPAM
  A domain parser for Alphafold models
  ☆32Updated 11 months ago
• Profluent-AI / proseLM-public
  Adapting protein language models for structure-conditioned design
  ☆35Updated 3 months ago
• GodzikLab / FATCAT-dist
  ☆15Updated last year
• guyuehuo / opendock
  ☆31Updated 3 weeks ago
• Bitbol-Lab / Phylogeny-MSA-Transformer
  Supporting repository for "Protein language models trained on multiple sequence alignments learn phylogenetic relationships" (https://www…
  ☆16Updated last year