PDB-REDO / AlphaBridge
☆21Updated last week
Related projects ⓘ
Alternatives and complementary repositories for AlphaBridge
- Fast deep learning methods for large-scale protein-protein interaction screening☆24Updated last month
- ☆21Updated this week
- ☆17Updated 2 weeks ago
- ☆17Updated this week
- Generating and scoring novel enzyme sequences with a variety of models and metrics☆61Updated 4 months ago
- ProteusAI is a library for the machine learning driven engineering of proteins. The library enables workflows from protein structure pred…☆31Updated this week
- Adapting protein language models for structure-conditioned design☆34Updated 3 months ago
- Local Interaction Score (LIS) Calculation from AlphaFold-Multimer (Enhanced Protein-Protein Interaction Discovery via AlphaFold-Multimer)☆42Updated 2 months ago
- Efficient manipulation of protein structures in Python☆32Updated last week
- Predict the structure of immune receptor proteins☆46Updated this week
- Predicting Nanobody Binding Epitopes Based on a Pretrained RoBERTa-based Model☆13Updated 5 months ago
- ☆27Updated 6 months ago
- Template-based protein design with Raygun☆43Updated last week
- ☆32Updated this week
- Graph Network for protein-protein interface including language model features☆25Updated 7 months ago
- Results and data from the pilot round of the Protein Engineering Tournament☆23Updated this week
- Fast AlphaFold-Multimer based pipeline for Protein-Protein Interaction (PPI) screening☆30Updated last month
- ColabFold protocol☆42Updated 3 weeks ago
- ☆25Updated 3 weeks ago
- PLM based active learning model for protein engineering☆44Updated 3 months ago
- ☆21Updated last year
- AlphaLink2: Integrating crosslinking MS data into Uni-Fold-Multimer☆47Updated 3 months ago
- ☆43Updated 2 weeks ago
- A Memetic Algorithm boosts accuracy and speed of all-atom protein-protein docking☆24Updated 7 months ago
- Ultra-fast in-silico structure mutation☆32Updated last year
- Official repo for paper "AlphaFold-Multimer accurately captures interactions and dynamics of intrinsically disordered protein regions"☆10Updated last month
- PDBench is a dataset and software package for evaluating fixed-backbone sequence design algorithms.☆27Updated last year
- Mutational Effect Transfer Learning (METL) framework for pretraining and finetuning biophysics-informed protein language models☆23Updated 2 weeks ago
- Inference code for PoET: A generative model of protein families as sequences-of-sequences☆47Updated 6 months ago
- An antibody-specific language model focusing on NGL prediction☆20Updated 2 months ago