Tumor Mutational Burden
☆65Mar 17, 2026Updated 3 months ago
Alternatives and similar repositories for TMB
Users that are interested in TMB are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Microsatellite Instability (MSI) detection using high-throughput sequencing data.☆116Apr 2, 2025Updated last year
- Snakemake workflow for somatic mutation detection without matched normal samples☆13Mar 4, 2023Updated 3 years ago
- 肿瘤突变负荷学习笔记(tumor mutation burden)☆16Dec 10, 2019Updated 6 years ago
- ☆18Aug 22, 2021Updated 4 years ago
- ☆126Sep 5, 2023Updated 2 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Snakemake workflow for neoantigen prediction☆15Sep 7, 2023Updated 2 years ago
- Clinical interpretation of somatic mutations in cancer☆53Feb 20, 2025Updated last year
- Microsatellite instability (MSI) detection for tumor only data.☆115Apr 23, 2024Updated 2 years ago
- ☆15Apr 20, 2023Updated 3 years ago
- A simplified pipeline for ctDNA sequencing data analysis☆38Sep 23, 2017Updated 8 years ago
- A bioinformatics tool for SV detection and virus integration discovery☆21Sep 12, 2017Updated 8 years ago
- A python tool to detect internal tandem duplication with robust variant allele frequency estimation☆12Jun 24, 2026Updated last week
- Targeted and non-targeted anticancer drugs and drug regimens☆31Jun 20, 2026Updated last week
- BICSEQ2 pipeline for processing CPTAC3 somatic WGS CNA☆16Apr 13, 2021Updated 5 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- ☆11Sep 7, 2023Updated 2 years ago
- A pipeline creation tool using Snakemake☆14Jun 8, 2026Updated 3 weeks ago
- BWA-MEME: Faster BWA-MEM2 using learned-index☆139Jun 3, 2026Updated 3 weeks ago
- Bioinformatic Analysis pipeLine for SomAtic Mutations In Cancer☆60Apr 27, 2026Updated 2 months ago
- Control-FREEC: Copy number and genotype annotation in whole genome and whole exome sequencing data☆177Aug 22, 2024Updated last year
- ☆182Jun 15, 2026Updated 2 weeks ago
- SV clustering☆31Jul 5, 2021Updated 4 years ago
- ☆11Apr 3, 2023Updated 3 years ago
- SpecHLA reconstructs entire diploid sequences of HLA genes and infers LOH events. It supports HLA-A, -B, -C, -DPA1, -DPB1, -DQA1, -DQB1, …☆58May 19, 2026Updated last month
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- microsatellite instability detection using tumor only or paired tumor-normal data☆133Jan 6, 2021Updated 5 years ago
- Clonality inference in multiple tumor samples using phylogeny☆13Sep 12, 2017Updated 8 years ago
- High-intensity sequencing reveals the sources of plasma circulating cell-free DNA variants☆22Mar 27, 2020Updated 6 years ago
- Tool for parsing outputs from fusion detection tools. Part of a nf-core/rnafusion pipeline. Checkout a live demo at https://matq007.githu…☆28Jun 22, 2026Updated last week
- Structural Variation and fusion detection using targeted sequencing data from circulating cell free DNA☆29Jun 6, 2024Updated 2 years ago
- filtering trio-based genetic variants in VCFs for clinical review☆21Aug 18, 2020Updated 5 years ago
- Call regions of homozygosity and make tentative UPD calls☆12Jun 27, 2025Updated last year
- CNV Rapid Aberration Detection And Reporting☆12Mar 2, 2021Updated 5 years ago
- FusionInspector code☆62May 21, 2026Updated last month
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- Structural Variation breakpoint discovery via adaptive learning☆17Jul 6, 2023Updated 2 years ago
- Personal Cancer Genome Reporter (PCGR)☆279Jun 23, 2026Updated last week
- Detection of CNVs (deletion/duplication) in target panel based NGS data☆17May 23, 2023Updated 3 years ago
- Library and tool for annotating MAF files using Genome Nexus Webserver API☆14Jun 15, 2026Updated 2 weeks ago
- Gene fusion detection and visualization☆132Feb 21, 2022Updated 4 years ago
- nextNEOpi: a comprehensive pipeline for computational neoantigen prediction☆93Jun 6, 2025Updated last year
- ☆11Oct 7, 2025Updated 8 months ago