Tumor Mutational Burden
☆66Mar 17, 2026Updated last month
Alternatives and similar repositories for TMB
Users that are interested in TMB are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Microsatellite Instability (MSI) detection using high-throughput sequencing data.☆116Apr 2, 2025Updated last year
- Snakemake workflow for somatic mutation detection without matched normal samples☆13Mar 4, 2023Updated 3 years ago
- 肿瘤突变负荷学习笔记(tumor mutation burden)☆16Dec 10, 2019Updated 6 years ago
- ☆18Aug 22, 2021Updated 4 years ago
- ☆123Sep 5, 2023Updated 2 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Snakemake workflow for neoantigen prediction☆15Sep 7, 2023Updated 2 years ago
- Clinical interpretation of somatic mutations in cancer☆52Feb 20, 2025Updated last year
- Microsatellite instability (MSI) detection for tumor only data.☆114Apr 23, 2024Updated 2 years ago
- ☆15Apr 20, 2023Updated 3 years ago
- A simplified pipeline for ctDNA sequencing data analysis☆38Sep 23, 2017Updated 8 years ago
- A bioinformatics tool for SV detection and virus integration discovery☆21Sep 12, 2017Updated 8 years ago
- Targeted and non-targeted anticancer drugs and drug regimens☆30Mar 23, 2026Updated last month
- A python tool to detect internal tandem duplication with robust variant allele frequency estimation☆12Feb 3, 2026Updated 2 months ago
- BICSEQ2 pipeline for processing CPTAC3 somatic WGS CNA☆16Apr 13, 2021Updated 5 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- ☆11Sep 7, 2023Updated 2 years ago
- A pipeline creation tool using Snakemake☆13Updated this week
- BWA-MEME: Faster BWA-MEM2 using learned-index☆137Mar 25, 2026Updated last month
- Bioinformatic Analysis pipeLine for SomAtic Mutations In Cancer☆58Apr 13, 2026Updated 2 weeks ago
- Control-FREEC: Copy number and genotype annotation in whole genome and whole exome sequencing data☆178Aug 22, 2024Updated last year
- ☆174Apr 10, 2026Updated 2 weeks ago
- SV clustering☆31Jul 5, 2021Updated 4 years ago
- ☆11Apr 3, 2023Updated 3 years ago
- SpecHLA reconstructs entire diploid sequences of HLA genes and infers LOH events. It supports HLA-A, -B, -C, -DPA1, -DPB1, -DQA1, -DQB1, …☆57Mar 25, 2026Updated last month
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- microsatellite instability detection using tumor only or paired tumor-normal data☆133Jan 6, 2021Updated 5 years ago
- Clonality inference in multiple tumor samples using phylogeny☆13Sep 12, 2017Updated 8 years ago
- High-intensity sequencing reveals the sources of plasma circulating cell-free DNA variants☆22Mar 27, 2020Updated 6 years ago
- Tool for parsing outputs from fusion detection tools. Part of a nf-core/rnafusion pipeline. Checkout a live demo at https://matq007.githu…☆28Jun 13, 2025Updated 10 months ago
- Structural Variation and fusion detection using targeted sequencing data from circulating cell free DNA☆29Jun 6, 2024Updated last year
- filtering trio-based genetic variants in VCFs for clinical review☆21Aug 18, 2020Updated 5 years ago
- Call regions of homozygosity and make tentative UPD calls☆12Jun 27, 2025Updated 10 months ago
- CNV Rapid Aberration Detection And Reporting☆12Mar 2, 2021Updated 5 years ago
- Structural Variation breakpoint discovery via adaptive learning☆17Jul 6, 2023Updated 2 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- FusionInspector code☆60Updated this week
- Personal Cancer Genome Reporter (PCGR)☆276Updated this week
- Detection of CNVs (deletion/duplication) in target panel based NGS data☆16May 23, 2023Updated 2 years ago
- Library and tool for annotating MAF files using Genome Nexus Webserver API☆12Feb 25, 2026Updated 2 months ago
- Gene fusion detection and visualization☆132Feb 21, 2022Updated 4 years ago
- nextNEOpi: a comprehensive pipeline for computational neoantigen prediction☆90Jun 6, 2025Updated 10 months ago
- ☆11Oct 7, 2025Updated 6 months ago