ExpressionAnalysis / CNV_Radar
CNV Rapid Aberration Detection And Reporting
☆12Updated 4 years ago
Alternatives and similar repositories for CNV_Radar:
Users that are interested in CNV_Radar are comparing it to the libraries listed below
- A webtool for the clinical interpretation of CNVs in rare disease patients☆12Updated 2 years ago
- novoBreak: local assembly for breakpoint detection in cancer genomes☆26Updated 6 years ago
- curPrimers is a tool for trimming primer sequences from amplicon based NGS reads☆16Updated 5 years ago
- Python scripts for matching output of Pacific Biosciences IsoSeq RNA-seq pipeline to an annotation file.☆23Updated 9 years ago
- A set of tools to annotate VCF files with expression and readcount data☆29Updated last month
- Plot CNV data with a genome viewer in R☆15Updated 8 years ago
- Identifying differentially methylated regions from MethylC-seq (bisulfite-sequencing) data☆27Updated last year
- Abismal is a mapper of FASTQ bisulfite-converted short reads (between 50 and 1000 bases) to a FASTA reference genome.☆18Updated last month
- Long read to rMATS☆31Updated last year
- Structural variant VCF annotation, duplicate removal and comparison☆31Updated last month
- A tool for sample swap identification in high throughput sequencing studies☆10Updated last month
- a Shiny/R application to view and annotate copy number variations☆28Updated 2 years ago
- Structural Variation breakpoint discovery via adaptive learning☆15Updated last year
- Structural Variation and fusion detection using targeted sequencing data from circulating cell free DNA☆27Updated 10 months ago
- BAMixChecker: A fast and efficient tool for sample matching checkup☆14Updated 2 years ago
- cnv-seq with custom bugfix☆10Updated 12 years ago
- SiNVICT: Ultra-Sensitive Detection of Single Nucleotide Variants and Indels in Circulating Tumour DNA☆27Updated 4 years ago
- Full-spectrum copy number variation detection by high-throughput DNA sequencing☆37Updated 3 years ago
- A bioinformatics tool for SV detection and virus integration discovery☆20Updated 7 years ago
- CADD-SV – a framework to score the effect of structural variants☆14Updated last month
- VCF files of SVs using long-read sequencing (LRS).☆22Updated 3 years ago
- R package specialized in HLA typing clustering and visualization based on specific similarity metrics☆12Updated 5 years ago
- Structural variant (SV) analysis tools☆36Updated 9 months ago
- ☆13Updated 2 years ago
- filtering trio-based genetic variants in VCFs for clinical review☆21Updated 4 years ago
- Simplify snpEff annotations for interesting cases☆21Updated 6 years ago
- ☆11Updated 2 years ago
- A simple script to create a customizable html file from an AnnotSV output.☆18Updated 11 months ago
- VisCap is an open flexible, software program targeted to clinical laboratories for inference and visualization of germline copy number va…☆22Updated 5 years ago
- Reproducibility workflow for Gigante et al., 2018: Using long-read sequencing to detect imprinted DNA methylation☆23Updated 6 years ago