ExpressionAnalysis / CNV_RadarLinks
CNV Rapid Aberration Detection And Reporting
☆12Updated 4 years ago
Alternatives and similar repositories for CNV_Radar
Users that are interested in CNV_Radar are comparing it to the libraries listed below
Sorting:
- A webtool for the clinical interpretation of CNVs in rare disease patients☆12Updated 3 years ago
- Fast, accurate and simple to use command line tool for variant detection in NGS data.☆12Updated 6 years ago
- wg-blimp: an end-to-end analysis pipeline for whole genome bisulfite sequencing data☆28Updated 3 years ago
- novoBreak: local assembly for breakpoint detection in cancer genomes☆25Updated 7 years ago
- Automated human exome/genome variants detection from FASTQ files☆23Updated 4 years ago
- SiNVICT: Ultra-Sensitive Detection of Single Nucleotide Variants and Indels in Circulating Tumour DNA☆27Updated 5 years ago
- ☆25Updated last year
- A set of tools to annotate VCF files with expression and readcount data☆29Updated 7 months ago
- Python scripts for matching output of Pacific Biosciences IsoSeq RNA-seq pipeline to an annotation file.☆23Updated 10 years ago
- Structural variant VCF annotation, duplicate removal and comparison☆34Updated 7 months ago
- Structural Variation and fusion detection using targeted sequencing data from circulating cell free DNA☆29Updated last year
- POSTRE: Prediction Of STRuctural variant Effects☆28Updated 7 months ago
- Long read to rMATS☆32Updated 2 years ago
- Polyidus provides a framework to catch chimeric DNA sequences with a tale of python☆10Updated 2 years ago
- CADD-SV – a framework to score the effect of structural variants☆15Updated 6 months ago
- Identifying differentially methylated regions from MethylC-seq (bisulfite-sequencing) data☆28Updated 2 years ago
- VCF files of SVs using long-read sequencing (LRS).☆22Updated 3 years ago
- for visual evaluation of read support for structural variation☆55Updated last year
- Suite of tools for analysing off-target reads to find CNVs, homozygous regions, and shared haplotypes☆31Updated last month
- ☆15Updated 7 years ago
- a Shiny/R application to view and annotate copy number variations☆28Updated 2 years ago
- A Framework to call Structural Variants from NGS based datasets☆22Updated 7 years ago
- Toolkit for the design and analysis of amplicon sequencing experiments utilizing unique molecular identifiers (UMIs)☆42Updated last month
- A tool for evaluating RNA seq mapping☆22Updated 6 years ago
- All-FIT - Allele-Frequency-based Imputation of Tumor Purity☆18Updated 6 years ago
- filtering trio-based genetic variants in VCFs for clinical review☆21Updated 5 years ago
- Plot CNV data with a genome viewer in R☆15Updated 8 years ago
- Validation runs using bcbio: germline, somatic, structural variant calling and RNA-seq analyses☆31Updated 3 years ago
- Somatic point mutation caller☆17Updated 9 years ago
- Abismal is a mapper of FASTQ bisulfite-converted short reads (between 50 and 1000 bases) to a FASTA reference genome.☆19Updated last week