CNV Rapid Aberration Detection And Reporting
☆13Mar 2, 2021Updated 5 years ago
Alternatives and similar repositories for CNV_Radar
Users that are interested in CNV_Radar are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆18Jul 13, 2021Updated 5 years ago
- CAVA (Clinical Annotation of VAriants)☆14Sep 28, 2018Updated 7 years ago
- This repository contains the code to run the ASCETS arm-level copy number events caller for targeted sequencing data. ASCETS produces arm…☆20Jul 6, 2026Updated last month
- ☆11Apr 3, 2023Updated 3 years ago
- A pipeline creation tool using Snakemake☆14Updated this week
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- PhenoSV: Interpretable phenotype-aware model for the prioritization of genes affected by structural variants.☆18Feb 11, 2025Updated last year
- Pan gGnome Viewer☆10Jul 10, 2025Updated last year
- RCK: Reconstruction of clone- and haplotype-specific Cancer Karyotypes☆19Apr 2, 2020Updated 6 years ago
- CLI to automate Nextflow pipeline testing☆13Dec 15, 2025Updated 8 months ago
- A webtool for the clinical interpretation of CNVs in rare disease patients☆14Jun 10, 2022Updated 4 years ago
- A tool for detecting CNVs from WGS data☆11Jul 9, 2020Updated 6 years ago
- Analysis pipelines for cancer genome sequencing in mice.☆23Jun 19, 2026Updated 2 months ago
- A collection of scripts used to recreate files and graphs used in the MMRF CoMMpass analysis.☆25Nov 23, 2025Updated 9 months ago
- An R package for predicting HR deficiency from mutation contexts☆30Feb 13, 2025Updated last year
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- SpecHLA reconstructs entire diploid sequences of HLA genes and infers LOH events. It supports HLA-A, -B, -C, -DPA1, -DPB1, -DQA1, -DQB1, …☆61Jul 27, 2026Updated last month
- curPrimers is a tool for trimming primer sequences from amplicon based NGS reads☆18May 26, 2025Updated last year
- A curated list of awesome clonality and tumor heterogeneity resources☆16Jun 25, 2019Updated 7 years ago
- MicrOSAtellite Instability Classifier☆15Apr 27, 2026Updated 4 months ago
- TOPMed Freeze 3 variant calling pipeline☆10Dec 5, 2018Updated 7 years ago
- ☆27Dec 9, 2022Updated 3 years ago
- Genomic data interpretation and visualization Workshop☆22May 8, 2026Updated 3 months ago
- Please switch to https://github.com/OpenGene/defastq☆29Jul 28, 2018Updated 8 years ago
- Convert structural variants to sequence graphs [ VCF + FASTA ---> GFA ]☆11Mar 6, 2024Updated 2 years ago
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- Plot CNV data with a genome viewer in R☆16Apr 5, 2017Updated 9 years ago
- Expedite large-scale identification of CNVs within predefined genomic regions. Online app available for those with GP2 Tier 2 Access.☆14Mar 16, 2026Updated 5 months ago
- R package for visualizing complex and multi-track 1D and 2D genomic data in GenomicRanges framework☆18May 10, 2026Updated 3 months ago
- Prioritizing Copy Number Variants (CNV) using Phenotype and Gene Functional Similarity☆18Mar 10, 2022Updated 4 years ago
- VPOT - Variant Prioritisation Ordering Tool. VPOT is a Python tool written to allow prioritisation of variants in ANNOVAR annotated VCF f…☆19Oct 27, 2021Updated 4 years ago
- The Nutmeg machine learning models☆11Jan 23, 2025Updated last year
- edit distance sequence tags and helpers☆12Feb 4, 2021Updated 5 years ago
- Moved to: https://github.com/maxplanck-ie/parkour2☆32Aug 24, 2022Updated 4 years ago
- Microsatellite instability (MSI) detection for tumor only data.☆117Apr 23, 2024Updated 2 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Accucopy is a computational method that infers Allele-Specific Copy Number alterations from low-coverage low-purity tumor sequencing data…☆16Mar 6, 2024Updated 2 years ago
- ☆11Dec 9, 2022Updated 3 years ago
- POSTRE: Prediction Of STRuctural variant Effects☆29Aug 18, 2026Updated last week
- EuBIC-MS Developers Meeting 2025 on Computational Mass Spectrometry☆11Nov 8, 2024Updated last year
- Characterization of Germline variants☆102Mar 15, 2022Updated 4 years ago
- Fast, self-contained VCF to MAF converter with embedded annotation (Rust rewrite of vcf2maf)☆22Jun 23, 2026Updated 2 months ago
- Linear-time, low-memory construction of variation graphs☆20Updated this week