J35P312 / FindSV
Structural variant pipeline
☆17Updated 4 years ago
Alternatives and similar repositories for FindSV:
Users that are interested in FindSV are comparing it to the libraries listed below
- Location of public benchmarking; primarily final results☆18Updated this week
- add true-negative SVs from a population callset to a truth-set.☆15Updated 2 years ago
- v2.x of the microassembly based somatic variant caller☆14Updated last week
- Tools to gather evidence for structural variation via breakpoint detection.☆19Updated 3 weeks ago
- Viola is a flexible and powerful python package designed specifically for analysis of genomic structural variant (SV) signatures.☆26Updated 6 months ago
- RCK: Reconstruction of clone- and haplotype-specific Cancer Karyotypes☆17Updated 4 years ago
- Structural Variation breakpoint discovery via adaptive learning☆15Updated last year
- Suite of tools for analysing off-target reads to find CNVs, homozygous regions, and shared haplotypes☆27Updated 7 months ago
- ☆16Updated last month
- Generate an enhanced VCF files from ClinVar XML Full releases☆13Updated last year
- Prioritize structural variants based on CADD scores☆28Updated 4 years ago
- Population-wide Deletion Calling☆35Updated 5 months ago
- ☆14Updated 7 months ago
- Structural Variation and fusion detection using targeted sequencing data from circulating cell free DNA☆27Updated 8 months ago
- Sample Contamination Estimate from VCF☆19Updated 3 months ago
- Samwell: a python package for using genomic files... well☆20Updated 2 years ago
- ☆9Updated 2 years ago
- ☆21Updated 3 weeks ago
- Structural variant VCF annotation, duplicate removal and comparison☆29Updated 2 months ago
- VisCap is an open flexible, software program targeted to clinical laboratories for inference and visualization of germline copy number va…☆22Updated 5 years ago
- ☆20Updated last year
- filtering trio-based genetic variants in VCFs for clinical review☆21Updated 4 years ago
- Hidden Markov Model based Copy number caller☆20Updated 3 months ago
- Unfazed by genomic variant phasing☆26Updated 8 months ago
- Structural variant (SV) analysis tools☆35Updated 7 months ago
- Callable Cancer Loci - assessment of sequencing coverage for actionable and pathogenic loci in cancer☆21Updated 4 years ago
- Benchmark structural variant calls against a reference set☆17Updated 3 months ago
- Stupid Simple Structural Variant View☆25Updated 8 years ago
- Integrative analysis of complex structural variants☆21Updated 4 years ago
- Ximmer is a system for CNV calling on exome and targeted genomic sequencing☆19Updated last week