Bioinformatic Analysis pipeLine for SomAtic Mutations In Cancer
☆59Oct 22, 2026Updated last week
Alternatives and similar repositories for BALSAMIC
Users that are interested in BALSAMIC are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Mutation Identification Pipeline. Read the latest documentation:☆48Nov 18, 2025Updated 11 months ago
- ☆21Sep 28, 2026Updated last month
- VCF visualization interface☆184Updated this week
- Cancer Predisposition Sequencing Reporter (CPSR)☆67Oct 24, 2026Updated last week
- TIDDIT - structural variant calling☆80Jul 20, 2026Updated 3 months ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Structural Variation breakpoint discovery via adaptive learning☆17Jul 6, 2023Updated 3 years ago
- Glue between Clinical Genomics apps☆12Updated this week
- Deep learning-based structural variant filtering method☆40Nov 19, 2023Updated 2 years ago
- Detection and Visualization of Exon-Level Copy Number Variants in Targeted Next Generation Sequencing Data☆18Nov 26, 2021Updated 4 years ago
- structural variant database software☆50Updated this week
- Structural variant pipeline☆18Jun 25, 2020Updated 6 years ago
- A tool to detect tissue- and cancer- specific epigenetic signatures in WGS data of liquid biopsies☆10Mar 30, 2023Updated 3 years ago
- Location of public benchmarking; primarily final results☆18Feb 17, 2025Updated last year
- Tool for parsing outputs from fusion detection tools. Part of a nf-core/rnafusion pipeline. Checkout a live demo at https://matq007.githu…☆28Jun 22, 2026Updated 4 months ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- A Snakemake workflow for calling small and structural variants under any kind of scenario (tumor/normal, tumor/normal/relapse, germline, …☆90Updated this week
- Whole Genome Sequenceing Structural Variation Pipelines☆18Apr 4, 2019Updated 7 years ago
- Allele-Specific Quantification of Structural Variations in Cancer Genomes☆19Mar 5, 2019Updated 7 years ago
- ☆18Jul 19, 2024Updated 2 years ago
- Accucopy is a computational method that infers Allele-Specific Copy Number alterations from low-coverage low-purity tumor sequencing data…☆16Mar 6, 2024Updated 2 years ago
- ☆15Apr 20, 2023Updated 3 years ago
- Prioritizing Copy Number Variants (CNV) using Phenotype and Gene Functional Similarity☆18Mar 10, 2022Updated 4 years ago
- Call and score variants from WGS/WES of rare disease patients.☆126Updated this week
- NiPTUNE. A Python library for NIPT analyses.☆11Nov 22, 2021Updated 4 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Characterization of Germline variants☆102Mar 15, 2022Updated 4 years ago
- Test data for MultiQC.☆24Oct 6, 2026Updated 3 weeks ago
- ☆28Updated this week
- Variant catalogue pipeline☆26Jan 30, 2026Updated 9 months ago
- Clinical Variant Annotation Pipeline☆10Apr 21, 2020Updated 6 years ago
- Microassembly based somatic variant caller for NGS data☆153Jun 23, 2022Updated 4 years ago
- A tutorial on structural variant calling for short read sequencing data☆45Oct 24, 2024Updated 2 years ago
- A modular annotation tool for genomic variants☆164Updated this week
- Official code repository for JAX-CNV☆14Jan 16, 2020Updated 6 years ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- Personal Cancer Genome Reporter (PCGR)☆284Updated this week
- Explore the cancer relevance of your gene list☆55Aug 11, 2026Updated 2 months ago
- Workflow for Sequenza, cellularity and ploidy☆28Jun 11, 2026Updated 4 months ago
- Integrative analysis of structural variations.☆41Dec 20, 2023Updated 2 years ago
- Call regions of homozygosity and make tentative UPD calls☆12Jun 27, 2025Updated last year
- A Mendelian approach to variant effect prediction built in keras☆22Aug 22, 2026Updated 2 months ago
- A Framework to call Structural Variants from NGS based datasets☆22Jan 22, 2018Updated 8 years ago