sigven / pharmOncoXLinks
Targeted and non-targeted anticancer drugs and drug regimens
☆30Updated last week
Alternatives and similar repositories for pharmOncoX
Users that are interested in pharmOncoX are comparing it to the libraries listed below
Sorting:
- Machine learning use cases for teaching☆13Updated 8 years ago
- Pipeline for the identification of cancer-related mutations from RNA-seq data☆14Updated 4 years ago
- RNA-seq quantifications: gene expression responses to human rhinovirus infection for 6 asthmatic and 6 non-asthmatic donors (SRP046226)☆19Updated 8 years ago
- Interactive Differential Expression AnaLysis - DE made accessible and reproducible☆31Updated last month
- An analysis of Arabidopsis RNA-seq data (hy5 mutant and wt, two replicates each; SRA accession SRX029582)☆16Updated 13 years ago
- R Interface to the NCBI SRA metadata☆23Updated 7 years ago
- 🧭 Navigate single-cell RNA-seq datasets in your web browser.☆29Updated 2 years ago
- TOP results by CONfident efFECT Sizes.☆15Updated last year
- RNA-seq for Mendelian disease diagnostics: A hands-on tutorial through bioinformatic tools and workflows☆17Updated 3 years ago
- Public data resources and Bioconductor: The goal of this workshop is to introduce Bioconductor packages for finding, accessing, and using…☆15Updated 8 months ago
- Query sequence data (VCF/BCF1/BCF2, Tabix, BGEN, PLINK) in R☆32Updated 3 months ago
- Algorithm to implement Fraction and Allelic Copy number Estimate from Tumor/normal Sequencing using unmatched normal sample(s) for log ra…☆12Updated 2 years ago
- ☆11Updated last year
- Calculate and plot distributions of genomic ranges☆27Updated 9 months ago
- Filter and prioritize fusion calls☆20Updated last week
- Create a cromphensive report of DEG list coming from any analysis of RNAseq data☆27Updated 3 months ago
- R interface to megadepth: BigWig and BAM related utilities☆12Updated last year
- Lollipop-diagram to interactively visualize genetic mutations☆33Updated last year
- Explore the cancer relevance of your gene list☆52Updated last month
- Molecular Signatures Database (MSigDB) in a data frame☆16Updated 7 years ago
- Bulk RNA-seq Data Processing, Quality Control, and Downstream Analysis Pipeline☆21Updated last year
- Data management of large-scale whole-genome sequence variant calls using GDS files (Development version only)☆46Updated 3 weeks ago
- Python function for TMB snake plots☆16Updated 5 years ago
- Callable Cancer Loci - assessment of sequencing coverage for actionable and pathogenic loci in cancer☆21Updated 5 years ago
- ☆10Updated 6 years ago
- A Practical (And Opinionated) Guide To Analyzing 450K Data☆35Updated 11 years ago
- A webtool for the clinical interpretation of CNVs in rare disease patients☆13Updated 3 years ago
- A set of tools to annotate VCF files with expression and readcount data☆30Updated 10 months ago
- Pipeline for generating RNAseq-based cancer patient reports☆11Updated 2 weeks ago
- mitochondrial variant analysis tools☆15Updated 4 years ago