Code accompanying "Prospective identification of hematopoietic lineage choice by deep learning", Nature methods 2017, DOI:10.1038/nmeth.4182
☆21Dec 18, 2025Updated 3 months ago
Alternatives and similar repositories for HematoFatePrediction
Users that are interested in HematoFatePrediction are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A downloadable pdf containing summary of frequently used pandas operations.☆10Sep 26, 2020Updated 5 years ago
- Normalization and difference calling for Next Generation Sequencing (NGS) data via joint multinomial modeling.☆11Oct 8, 2021Updated 4 years ago
- A BaSiC Tool for Background and Shading Correction of Optical Microscopy Images☆65Mar 12, 2025Updated last year
- A fast and efficient short read mapper☆13Nov 7, 2021Updated 4 years ago
- Processing and analysis of data coming from Illumina sequencing machines☆10Mar 14, 2026Updated last week
- DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- AlignerBoost is a generalized software toolkit for boosting Next-Gen sequencing mapping precision using a Bayesian based mapping quality …☆11Mar 1, 2022Updated 4 years ago
- A deletion finder through re-aligning the whole soft-clipping read☆12Jul 2, 2016Updated 9 years ago
- gvcf aggregation tool☆12Feb 7, 2018Updated 8 years ago
- Simple and quick FastQ and FastA tool for file reading and conversion☆17Jul 11, 2014Updated 11 years ago
- RNA-Seq Unified Mapper☆27Sep 9, 2022Updated 3 years ago
- ☆12Jan 21, 2016Updated 10 years ago
- NGS perl modules☆11Mar 19, 2026Updated last week
- R function to plot high quality, elegant heatmap using 'ggplot2' graphics . Some of the important features of this package are, colorin…☆11Apr 19, 2016Updated 9 years ago
- Applying IDR analysis to Homer peaks.☆15May 8, 2020Updated 5 years ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- COMETgazer mehylation analysis software suite☆10Jul 21, 2019Updated 6 years ago
- scRNA-seq analysis beyond gene annotations using transcriptionally active regions (TARs) generated from sequence alignment data☆10Jul 25, 2022Updated 3 years ago
- example applications built using bíogo☆18Apr 19, 2021Updated 4 years ago
- RNF framework for NGS: simulation of reads, evaluation of mappers, conversion of RNF-compliant data.☆14Nov 10, 2025Updated 4 months ago
- Gordon's Text utils Library☆10Apr 11, 2022Updated 3 years ago
- Rcount: simple and flexible RNA-Seq read counting☆12May 19, 2022Updated 3 years ago
- Long Approximate Matches-based Split Aligner☆13Apr 6, 2017Updated 8 years ago
- Targeted Amplicon Bisulfite Sequencing Analysis Tool☆11May 8, 2019Updated 6 years ago
- R package to quickly obtain count vectors from indexed bam files☆15Jun 13, 2025Updated 9 months ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click and start building anything your business needs.
- Estimation of pairwise distances under a probabilistic framework☆11Aug 11, 2023Updated 2 years ago
- A scientific publication, describing a way to improve microscopy. This repository hosts everything you need to reproduce our results. Rea…☆13Jun 22, 2024Updated last year
- Peakzilla is a self-learning algorithm to identify transcription factor binding sites from ChIP-seq data. I would be very happy if you tr…☆21Aug 18, 2025Updated 7 months ago
- Next generation sequencing (NGS/HTS) tools.☆19Jan 25, 2024Updated 2 years ago
- ☆13Jan 8, 2020Updated 6 years ago
- DeeNA Zip (SAM/BAM compression tool)☆13May 25, 2019Updated 6 years ago
- An application to remove PCR duplicates from high throughput sequencing runs.☆11Apr 22, 2018Updated 7 years ago
- SNAPR: a bioinformatics pipeline for efficient and accurate RNA-seq alignment and analysis☆25Apr 7, 2015Updated 10 years ago
- Python wrapper around the popular ChIP-Seq peak caller SICER☆15Dec 7, 2017Updated 8 years ago
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- Multiscale earth mover's distance methods for tree and manifold structured data☆12Mar 8, 2025Updated last year
- Cross-platform GUI desktop application for making biological heatmaps☆19Nov 10, 2022Updated 3 years ago
- A Modern Perl Framework for High Throughput Sequencing analysis☆17May 6, 2020Updated 5 years ago
- This repository is the working directory for the Garnet-Forest bundle of python scripts for analyzing diverse forms of 'omic' data in a n…☆31Jan 9, 2019Updated 7 years ago
- WALT is a read mapping program for bisulfite sequencing DNA methylation studies.☆17Aug 23, 2022Updated 3 years ago
- Ritornello is a high fidelity control free ChIP-seq peak calling algorithm☆13Aug 23, 2018Updated 7 years ago
- ☆15Oct 19, 2023Updated 2 years ago