Alternatives and similar repositories for intro_python

Users that are interested in intro_python are comparing it to the libraries listed below

• kholsinger / Lecture-Notes-in-Population-Genetics
  LaTeX and associated files for lecture notes used in EEB 5348 at the University of Connecticut
  ☆36Updated 2 years ago
• NBISweden / Genome_Annotation_workflow
  A set of workflows written in Nextflow for Genome Annotation.
  ☆46Updated last week
• guyleonard / genomics_adventure
  Workshop on Genomics - Genomics Adventure
  ☆46Updated 2 weeks ago
• mccoy-lab / hgv_modules
  Teaching modules for Human Genome Variation Lab.
  ☆20Updated 8 months ago
• pievos101 / PopGenome
  An Efficient Swiss Army Knife for Population Genomic Analyses in R
  ☆38Updated last year
• schatzlab / appliedgenomics2021
  Materials for Spring 2021 Applied Genomics Course
  ☆53Updated 4 years ago
• evolgenomics / haplotagging
  Code and binaries related to processing haplotagging data
  ☆15Updated 3 years ago
• dcgerard / updog
  Flexible Genotyping of Polyploids using Next Generation Sequencing Data
  ☆31Updated this week
• ANGSD / NgsRelate
  ☆46Updated 10 months ago
• Rosemeis / fastmixture
  Software for ancestry estimation in unrelated individuals
  ☆23Updated last week
• nt246 / physalia-lcwgs
  Files for the the Physalia course on Population genomic inference from low-coverage whole-genome sequencing data, Oct 10-13, 2022
  ☆69Updated 3 months ago
• dportik / Pandas-for-Population-Structure-Barplots
  A jupyter notebook tutorial for making high-quality barplot figures from population structure analyses (Admixture, Structure) with Python…
  ☆16Updated 9 months ago
• hemstrow / snpR
  ☆31Updated last week
• bcbc-group / CyVerese_SNP_calling_webinar
  ☆10Updated 5 years ago
• lczech / grenedalf
  Toolkit for Population Genetic Statistics from Pool-Sequenced Samples, e.g., in Evolve and Resequence experiments
  ☆48Updated 3 months ago
• enormandeau / snplift
  Transfer coordinates across genomes
  ☆23Updated 8 months ago
• GenomicsAotearoa / RNA-seq-workshop
  ☆19Updated last year
• mfumagalli / Copenhagen
  Analysis of genotyping and next-generation sequencing data in medical and population genetics
  ☆23Updated 3 years ago
• bcbc-group / Botany2020NMGWorkshop
  A repo for scripts and associated files for the Botany 2020 Virtual Nonmodel Genomics Workshop
  ☆15Updated 5 years ago
• sabifo4 / mammals_dating
  Methods for the analyses described in Álvarez-Carretero et al. 2022 (https://doi.org/10.1038/s41586-021-04341-1)
  ☆20Updated last month
• estebanpw / chromeister
  A dotplot generator for large chromosomes
  ☆43Updated 2 years ago
• mijangos81 / PopGenR
  Population Genomics in R workshop
  ☆12Updated last year
• grenaud / vgan
  Suite of tools for pangenomics built using vg
  ☆25Updated 6 months ago
• kocherlab / pipemake
  A pipeline creation tool using Snakemake
  ☆12Updated last month
• sanjaynagi / rna-seq-pop
  Snakemake workflow for Illumina RNA-sequencing experiments - extract population genomic signals from RNA-Seq data
  ☆18Updated 10 months ago
• johnssproul / RepeatProfiler
  ☆27Updated 11 months ago
• jaredgk / PPP
  Repository for pipeline code
  ☆26Updated last year
• kr-colab / locator
  deep learning prediction of geographic location from individual genome sequences
  ☆52Updated last year
• pgugger / LandscapeGenomics
  Tutorials for bioinformatics and data analysis related to landscape genomics
  ☆30Updated 7 years ago
• slzarate / parliament2
  Runs a combination of tools to generate structural variant calls on short-read whole-genome sequencing data
  ☆22Updated 4 years ago