Description Materials for Spring 2020 Applied Genomics Course
☆16Apr 22, 2020Updated 5 years ago
Alternatives and similar repositories for appliedgenomics2020
Users that are interested in appliedgenomics2020 are comparing it to the libraries listed below
Sorting:
- STR genotyping with WGS and Amplicon/Target sequencing data☆14Feb 2, 2026Updated last month
- COsine SImilarity-based Genotyper using pangenomes☆31Feb 13, 2026Updated last month
- Ansible playbook for managing Galaxy infrastructure. For the playbook managing Galaxy itself, see https://github.com/galaxyproject/usegal…☆14Mar 12, 2026Updated last week
- Toolkit for VNTR genotyping and repeat-pan genome graph construction☆31Aug 18, 2025Updated 7 months ago
- A python wrapper around SURVIVOR☆20Feb 15, 2024Updated 2 years ago
- Working example of snakemake tutorial using UAB Cheaha computing cluster via SLURM scheduler☆10Nov 8, 2018Updated 7 years ago
- New Zealand public sector websites☆14Apr 3, 2021Updated 4 years ago
- Creates Random Coding Sequences with specified GC content and Amino Acid usage☆10Jun 21, 2022Updated 3 years ago
- Structural Variants Assessment Based on Haplotype-resolved Assemblies☆21Apr 28, 2023Updated 2 years ago
- Galaxy Workflow Format 2☆13Updated this week
- tutorial on pggb☆36Jan 13, 2025Updated last year
- ☆36Dec 6, 2017Updated 8 years ago
- A VCF comparison engine for structual variant benchmarking☆23Sep 26, 2025Updated 5 months ago
- Standard database for the TBProfiler tool☆30Mar 12, 2026Updated last week
- Shark genomics & beyond - This is a central portal page for the project Squalomix, directed mainly by Molecular Life History Laboratory a…☆11Aug 15, 2025Updated 7 months ago
- A method for measuring chromosome-specific telomere length from long reads☆22May 20, 2024Updated last year
- association analysis of distance matrices using gradient forest approach☆16Oct 7, 2025Updated 5 months ago
- Calculate AUC based on GWAS summary statistics only☆10Jun 29, 2018Updated 7 years ago
- Daylight shown for any time on world equirectangular projection rendered with SVG.☆20Mar 4, 2019Updated 7 years ago
- Reducing reference bias using multiple population reference genomes☆34May 27, 2024Updated last year
- Analysis of sequencing error profile for long read data.☆13Mar 30, 2023Updated 2 years ago
- MYB transcription factors are one of the largest gene family in plants and control many processes. This repository provides additional ba…☆12Feb 26, 2026Updated 3 weeks ago
- OpenPOWER Foundation General Information & Repository Listing☆26Mar 28, 2022Updated 3 years ago
- Improved Phased Assembler☆28Mar 11, 2022Updated 4 years ago
- Standard operating procedures for H3ABionet data processing and analyses☆11Aug 30, 2021Updated 4 years ago
- assembly evaluation tool☆35May 11, 2022Updated 3 years ago
- Materials for Spring 2021 Applied Genomics Course☆54Apr 21, 2021Updated 4 years ago
- Handy command line utility for Galaxy administrators☆24Updated this week
- The pipelines were built in the project resolving the genome of a diploid potato. Most of the scripts were sepcially designed to perform …☆23Jul 4, 2023Updated 2 years ago
- Non-parametric structural variant genotyper☆15Nov 18, 2021Updated 4 years ago
- Align subreads to ccs reads☆14Jun 11, 2025Updated 9 months ago
- A MinION-based pipeline for tracking species biodiversity☆13Feb 19, 2024Updated 2 years ago
- A checklist to help you avoid all those minor errors when submitting a scientific manuscript☆88Feb 16, 2024Updated 2 years ago
- Common data model proposal for biomedical research intended to facilitate and encourage data sharing and reuse☆20Oct 18, 2022Updated 3 years ago
- DDI-LLM:💊 Drug-Drug Interaction Prediction: Experimenting With Large Language-Based Drug Information Embedding For Multi-View Representa…☆14Sep 15, 2023Updated 2 years ago
- overlapping bases in read-pairs from a fragment indicate accuracy and reveal error-prone sites☆34Jun 6, 2025Updated 9 months ago
- Scaffolding with Ultralong Reads☆15Nov 11, 2020Updated 5 years ago
- SALSA: A tool to scaffold long read assemblies with Hi-C data☆188May 17, 2024Updated last year
- YAGCloser: Yet-Another-Gap-Closer based on spanning of long reads.☆12Nov 6, 2025Updated 4 months ago