arosenfeld / immunedb
ImmuneDB - A system for the analysis and exploration of high-throughput adaptive immune receptor sequencing data
☆21Updated 11 months ago
Alternatives and similar repositories for immunedb
Users that are interested in immunedb are comparing it to the libraries listed below
Sorting:
- ImReP is a computational method for rapid and accurate profiling of the adaptive immune repertoire from regular RNA-Seq data.☆12Updated last year
- MuPeXI: the mutant peptide extractor and informer, a tool for predicting neo-epitopes from tumor sequencing data.☆50Updated 5 years ago
- IRIS: Isoform peptides from RNA splicing for Immunotherapy target Screening☆24Updated 8 months ago
- 🏺 Exploring novel tumor epitope identification☆34Updated 4 years ago
- Predict mutated T-cell epitopes from sequencing data☆30Updated 3 months ago
- Summary statistics for repertoires☆17Updated 2 years ago
- Comparison of Adaptive Immune Receptor Repertoires☆27Updated 3 months ago
- Companion to "A genome-wide almanac of co-essential modules assigns function to uncharacterized genes" (https://doi.org/10.1101/827071)☆27Updated 2 years ago
- Tools related to the Genomics of Drug Sensitivity in Cancer (GDSC) projects (http://www.cancerrxgene.org/ )☆36Updated 3 years ago
- ☆38Updated last year
- Mean Alterations Using Discrete Expression☆14Updated last year
- Quantifiable predictive features define epitope-specific T cell receptor repertoires☆13Updated 2 years ago
- Transcription Factor Binding Prediction from ATAC-seq and scATAC-seq with Deep Neural Networks☆28Updated last month
- Detect somatic variants from tumor and normal WGS/WXS data☆16Updated last week
- 📝 [Tutorial] RepSeq data mining basics in R☆10Updated 6 years ago
- Alignment and antibody assembly pipelines for Croote et al. (Science, 2018)☆10Updated 3 years ago
- A novel PSSM based software for predicting class I peptide-HLA binding affinity☆17Updated 8 years ago
- Multi-omics disease sub-type specific drug repositioning aided with expression signatures from ConnectivityMap☆16Updated 5 years ago
- Multi-study integration of cellular trajectories☆19Updated 4 years ago
- Pipeline to call neoantigens from intron retention events derived from RNA-Seq data.☆28Updated 4 years ago
- Collection of tools to retrieve siRNA (small interfering RNA) candidate sequences targeting your gene of interest from popular siRNA desi…☆11Updated 2 years ago
- Epitope immunogenicity prediction through in silico TCR-peptide contact potential profiling.☆24Updated last year
- A Bio2BEL package for integrating pathway-related information from KEGG in BEL☆13Updated 3 years ago
- PRedictor of IMmunogenic Epitopes☆20Updated last year
- Generate Robust Disease-Specific Response Signatures from the LINCS-L1000 Data☆15Updated 3 years ago
- Software for Ontogenic aNalysis of Antibody Repertoires☆18Updated 3 months ago
- Differential Mutation Analysis