scharch / SONARLinks
Software for Ontogenic aNalysis of Antibody Repertoires
☆19Updated 2 months ago
Alternatives and similar repositories for SONAR
Users that are interested in SONAR are comparing it to the libraries listed below
Sorting:
- Analysis of antibody NGS data☆13Updated 3 years ago
- Comparison of Adaptive Immune Receptor Repertoires☆28Updated 10 months ago
- Analyze antibody repertoires and discover new V genes from high-throughput sequencing reads☆16Updated 2 years ago
- A Computational Workflow for Designing Libraries of sgRNAs for CRISPR-Mediated Base Editing, and much more☆19Updated last year
- Tool package to perform in-silico CRISPR analysis and assessment☆34Updated 3 weeks ago
- Ultra-fast 5' and 3' demultiplexer☆28Updated last year
- predicts neoepitopes from phased somatic mutations detected using tumor/normal DNA-seq data☆27Updated 2 years ago
- Toolkit for the design and analysis of amplicon sequencing experiments utilizing unique molecular identifiers (UMIs)☆41Updated 3 months ago
- B- and T-cell receptor sequence annotation, simulation, clonal family and germline inference, and affinity prediction☆61Updated last month
- Predicting gene expression levels from genomic sequences☆55Updated 5 years ago
- A package for designing activity-informed nucleic acid diagnostics for viruses.☆34Updated 2 years ago
- Bioinformatic pipeline for identifying dsDNA breaks by marker based incorporation, such as breaks induced by designer nucleases like Cas9…☆22Updated 4 months ago
- MuPeXI: the mutant peptide extractor and informer, a tool for predicting neo-epitopes from tumor sequencing data.☆52Updated 6 years ago
- programs and scripts, mainly python, for analyses related to nucleic or protein sequences☆24Updated last month
- An Artificial Neural Network-based discriminator for validating clinically significant genomic variants☆35Updated last year
- Modelling insertion efficiency for Prime Insertion Experiments☆13Updated last year
- Multi-Omics Peptide Generator☆30Updated last month
- ImReP is a computational method for rapid and accurate profiling of the adaptive immune repertoire from regular RNA-Seq data.☆29Updated 6 years ago
- MetaLogo: a heterogeneity-aware sequence logo generator and aligner☆21Updated 2 years ago
- Robust, tested workflows for RNA-seq, ChIP-seq and other high-throughput sequencing analysis☆23Updated this week
- FREE Divergence Error-Correcting DNA Barcodes☆27Updated 10 months ago
- 🧬 MSABrowser: dynamic and fast visualization of sequence alignments, variations, and annotations☆35Updated last year
- ☆18Updated last year
- Ultra rapid nanopore whole genome sequencing pipeline, published in https://www.nature.com/articles/s41587-022-01221-5☆19Updated last year
- A Nextflow pipeline to align, merge, and organize large PhIP-Seq datasets☆12Updated 10 months ago
- Versatile FASTA/FASTQ demultiplexer.☆33Updated last year
- Generate robust DNA barcode sets☆33Updated last year
- Pipeline for Ribosome Profiling Data☆18Updated 2 years ago
- pathoscore evaluates variant pathogenicity tools and scores.☆22Updated 3 years ago
- Debarcer: A package for De-Barcoding and Error Correction of sequencing data containing molecular barcodes☆15Updated 4 years ago