scharch / SONARLinks
Software for Ontogenic aNalysis of Antibody Repertoires
☆19Updated 4 months ago
Alternatives and similar repositories for SONAR
Users that are interested in SONAR are comparing it to the libraries listed below
Sorting:
- Comparison of Adaptive Immune Receptor Repertoires☆28Updated last year
- Analyze antibody repertoires and discover new V genes from high-throughput sequencing reads☆16Updated 2 years ago
- Analysis of antibody NGS data☆13Updated 3 years ago
- Tool package to perform in-silico CRISPR analysis and assessment☆34Updated 2 months ago
- Infer selection pressures on features of amino acid CDR3 sequences.☆25Updated last year
- Versatile FASTA/FASTQ demultiplexer.☆33Updated last year
- B- and T-cell receptor sequence annotation, simulation, clonal family and germline inference, and affinity prediction☆62Updated this week
- A Computational Workflow for Designing Libraries of sgRNAs for CRISPR-Mediated Base Editing, and much more☆19Updated last year
- Modelling insertion efficiency for Prime Insertion Experiments☆13Updated last year
- MetaLogo: a heterogeneity-aware sequence logo generator and aligner☆21Updated 2 years ago
- FREE Divergence Error-Correcting DNA Barcodes☆28Updated last year
- draw sequence logos tailored to deep mutational scanning (DMS) data☆12Updated 2 years ago
- A Python package for gene network analysis☆32Updated 3 years ago
- DRUGZ software☆24Updated 4 years ago
- ImReP is a computational method for rapid and accurate profiling of the adaptive immune repertoire from regular RNA-Seq data.☆29Updated 6 years ago
- GOMCL: a toolkit to cluster, evaluate, and extract non-redundant associations of Gene Ontology-based functions☆22Updated 2 years ago
- programs and scripts, mainly python, for analyses related to nucleic or protein sequences☆24Updated last week
- MAVE-NN: genotype-phenotype maps from multiplex assays of variant effect☆28Updated last month
- CRISPR Indel, base edit analysis☆11Updated 5 years ago
- IMGT segment library converted to RepSeq.IO JSON format☆13Updated 2 years ago
- A Nextflow pipeline to align, merge, and organize large PhIP-Seq datasets☆12Updated last year
- ☆18Updated 9 months ago
- IGoR is a C++ software designed to infer V(D)J recombination related processes from sequencing data. Find full documentation at:☆52Updated last month
- Bioinformatic pipeline for identifying dsDNA breaks by marker based incorporation, such as breaks induced by designer nucleases like Cas9…☆22Updated 6 months ago
- Bayesian enrichment estimation in R☆11Updated 2 months ago
- ☆18Updated last year
- A package for designing activity-informed nucleic acid diagnostics for viruses.☆35Updated 2 years ago
- Code and data used in The Great Repertoire Project☆29Updated 4 years ago
- predicts neoepitopes from phased somatic mutations detected using tumor/normal DNA-seq data☆27Updated 2 years ago
- Predicting gene expression levels from genomic sequences☆54Updated 5 years ago