Software for Ontogenic aNalysis of Antibody Repertoires
☆19Sep 25, 2025Updated 5 months ago
Alternatives and similar repositories for SONAR
Users that are interested in SONAR are comparing it to the libraries listed below
Sorting:
- VDJ assignment and antibody sequence annotation. Scalable from a single sequence to billions of sequences.☆44Feb 22, 2026Updated last week
- B- and T-cell receptor sequence annotation, simulation, clonal family and germline inference, and affinity prediction☆62Updated this week
- IMGT segment library converted to RepSeq.IO JSON format☆13Mar 21, 2023Updated 2 years ago
- Analysis of antibody NGS data☆13May 17, 2022Updated 3 years ago
- Analyze antibody repertoires and discover new V genes from high-throughput sequencing reads☆16Dec 5, 2023Updated 2 years ago
- B-cell repertoire and clonal family tree explorer☆17Feb 11, 2026Updated 2 weeks ago
- Code and data used in The Great Repertoire Project☆29Jun 14, 2021Updated 4 years ago
- IgSimulator is a versatile tool for simulation of immunoglobulin repertoire☆12Nov 25, 2016Updated 9 years ago
- AIRR Community Data Standards☆40Updated this week
- Package to design primers for MutaSeq and related methods☆11Jan 15, 2021Updated 5 years ago
- ImmuneDB - A system for the analysis and exploration of high-throughput adaptive immune receptor sequencing data☆22May 21, 2024Updated last year
- Quantifiable predictive features define epitope-specific T cell receptor repertoires☆13Dec 8, 2022Updated 3 years ago
- Infer selection pressures on features of amino acid CDR3 sequences.☆25Apr 17, 2024Updated last year
- AmpliCI, a model-based algorithm for denoising Illumina amplicon data.☆24Nov 28, 2025Updated 3 months ago
- Interactive browser for the VDJdb database☆15Feb 11, 2026Updated 2 weeks ago
- Altered TCR Ligand Affinities and Structures☆12Dec 1, 2023Updated 2 years ago
- IGoR is a C++ software designed to infer V(D)J recombination related processes from sequencing data. Find full documentation at:☆52Jan 7, 2026Updated last month
- Multiplex Primer Design☆12May 3, 2020Updated 5 years ago
- The Patent and Literature Antibody Database (PLAbDab): an evolving reference set of functionally diverse, literature-annotated antibody s…☆13Sep 21, 2023Updated 2 years ago
- Predicting Future Influenza Virus Sequences with Machine Learning☆31Feb 11, 2018Updated 8 years ago
- Workflow to prepare high accuracy single molecule consensus sequences from amplicon data using unique molecular identifiers☆35Feb 27, 2024Updated 2 years ago
- ☆15Aug 21, 2025Updated 6 months ago
- B-cell and T-cell Adaptive Immune Receptor Repertoire (AIRR) sequencing analysis pipeline using the Immcantation framework☆74Feb 19, 2026Updated last week
- A toolkit to design standard primers, multiplexed primers, and primers around SV's☆13Oct 29, 2022Updated 3 years ago
- Absolve antibody variable domain sequence analysis☆18Sep 13, 2018Updated 7 years ago
- Toolkit for the design and analysis of amplicon sequencing experiments utilizing unique molecular identifiers (UMIs)☆42Aug 29, 2025Updated 6 months ago
- Summary statistics for repertoires☆17Feb 1, 2023Updated 3 years ago
- GUI for batch primer design with graphical output for PCR and SNP detection☆17Jun 28, 2018Updated 7 years ago
- Color DNA/RNA bases in terminal output☆21Aug 29, 2017Updated 8 years ago
- imNet: a Sequence Network Construction Toolkit☆20Jul 7, 2020Updated 5 years ago
- HLA-I ligand predictor☆43Sep 24, 2025Updated 5 months ago
- An algorithm for error-correction of immunosequencing Illumina MiSeq reads and immunoproteogenomic analysis☆18Nov 1, 2018Updated 7 years ago
- [Deprecated, see https://github.com/antigenomics/mirpy and other tools @antigenomics] Post-analysis of immune repertoire sequencing data☆142May 23, 2024Updated last year
- Immunoglobulin and T-Cell receptor rearrangement software☆50Jan 9, 2026Updated last month
- ☆40Sep 14, 2016Updated 9 years ago
- Used to trim off the primer sequence from mutiplex amplicon sequencing☆24Dec 20, 2025Updated 2 months ago
- ☆22Apr 10, 2025Updated 10 months ago
- Tool for rapid clustering of antibody models by the structure of their CDRs.☆23Jul 14, 2025Updated 7 months ago
- ☆11Jul 3, 2022Updated 3 years ago