scharch / SONARLinks
Software for Ontogenic aNalysis of Antibody Repertoires
☆19Updated 2 months ago
Alternatives and similar repositories for SONAR
Users that are interested in SONAR are comparing it to the libraries listed below
Sorting:
- Analysis of antibody NGS data☆13Updated 3 years ago
- Comparison of Adaptive Immune Receptor Repertoires☆28Updated 10 months ago
- Analyze antibody repertoires and discover new V genes from high-throughput sequencing reads☆16Updated 2 years ago
- Bioinformatic pipeline for identifying dsDNA breaks by marker based incorporation, such as breaks induced by designer nucleases like Cas9…☆22Updated 4 months ago
- ☆18Updated last year
- A Computational Workflow for Designing Libraries of sgRNAs for CRISPR-Mediated Base Editing, and much more☆19Updated last year
- Versatile FASTA/FASTQ demultiplexer.☆33Updated last year
- Infer selection pressures on features of amino acid CDR3 sequences.☆24Updated last year
- Robust, tested workflows for RNA-seq, ChIP-seq and other high-throughput sequencing analysis☆23Updated this week
- Code and data used in The Great Repertoire Project☆29Updated 4 years ago
- B- and T-cell receptor sequence annotation, simulation, clonal family and germline inference, and affinity prediction☆61Updated last month
- A Nextflow pipeline to align, merge, and organize large PhIP-Seq datasets☆12Updated 10 months ago
- Multi-Omics Peptide Generator☆30Updated last month
- MetaLogo: a heterogeneity-aware sequence logo generator and aligner☆21Updated 2 years ago
- Predicting gene expression levels from genomic sequences☆55Updated 5 years ago
- Bayesian enrichment estimation in R☆11Updated last month
- predicts neoepitopes from phased somatic mutations detected using tumor/normal DNA-seq data☆27Updated 2 years ago
- programs and scripts, mainly python, for analyses related to nucleic or protein sequences☆24Updated last month
- Collection of tools to retrieve siRNA (small interfering RNA) candidate sequences targeting your gene of interest from popular siRNA desi…☆15Updated 3 years ago
- Tool package to perform in-silico CRISPR analysis and assessment☆34Updated last month
- ImReP is a computational method for rapid and accurate profiling of the adaptive immune repertoire from regular RNA-Seq data.☆29Updated 6 years ago
- Ultra-fast 5' and 3' demultiplexer☆28Updated last year
- FREE Divergence Error-Correcting DNA Barcodes☆27Updated 10 months ago
- GOMCL: a toolkit to cluster, evaluate, and extract non-redundant associations of Gene Ontology-based functions☆22Updated 2 years ago
- IMGT segment library converted to RepSeq.IO JSON format☆13Updated 2 years ago
- Comprehensive and scalable differential splicing analyses☆17Updated last month
- Feature-rich Python implementation of the tximport package for gene count estimation.☆41Updated last month
- A package for designing activity-informed nucleic acid diagnostics for viruses.☆34Updated 2 years ago
- ☆39Updated 5 months ago
- draw sequence logos tailored to deep mutational scanning (DMS) data☆12Updated 2 years ago