scharch / SONAR
Software for Ontogenic aNalysis of Antibody Repertoires
☆17Updated last year
Related projects ⓘ
Alternatives and complementary repositories for SONAR
- Comparison of Adaptive Immune Receptor Repertoires☆25Updated last year
- Analysis of antibody NGS data☆12Updated 2 years ago
- Analyze antibody repertoires and discover new V genes from high-throughput sequencing reads☆17Updated 11 months ago
- predicting peptide and TCR interaction☆20Updated 3 years ago
- Absolve antibody variable domain sequence analysis☆16Updated 6 years ago
- ImmuneDB - A system for the analysis and exploration of high-throughput adaptive immune receptor sequencing data☆20Updated 5 months ago
- Code and data used in The Great Repertoire Project☆29Updated 3 years ago
- PRedictor of IMmunogenic Epitopes☆16Updated 5 months ago
- IMGT segment library converted to RepSeq.IO JSON format☆13Updated last year
- Tool package to perform in-silico CRISPR analysis and assessment☆22Updated 6 months ago
- predicts neoepitopes from phased somatic mutations detected using tumor/normal DNA-seq data☆26Updated last year
- ☆46Updated 2 years ago
- off-targeting assessment of Cas9 gRNAs☆12Updated 3 years ago
- Bioinformatic pipeline for identifying dsDNA breaks by marker based incorporation, such as breaks induced by designer nucleases like Cas9…☆20Updated 7 months ago
- ☆14Updated 3 months ago
- ImReP is a computational method for rapid and accurate profiling of the adaptive immune repertoire from regular RNA-Seq data.☆28Updated 5 years ago
- Tool for Motif Deconvolution in large HLA-II ligand datasets without the need of prior alignment.☆11Updated last year
- A guide to running MaxQuant in Linux☆31Updated 4 years ago
- IGoR is a C++ software designed to infer V(D)J recombination related processes from sequencing data. Find full documentation at:☆48Updated 2 years ago
- Summary statistics for repertoires☆16Updated last year
- draw sequence logos tailored to deep mutational scanning (DMS) data☆12Updated last year
- A novel PSSM based software for predicting class I peptide-HLA binding affinity☆17Updated 7 years ago
- BAGEL software☆26Updated 9 months ago
- Annotation of mutated peptide sequences with published or novel potential neoantigen descriptors☆27Updated 3 months ago
- Versatile FASTA/FASTQ demultiplexer.☆32Updated 5 months ago
- Detects hotspot regions for somatic mutations in 3D protein structures☆2Updated 7 months ago
- DRUGZ software☆22Updated 3 years ago
- Saluki, a method to predict mRNA half-lives from sequence☆21Updated 2 years ago
- HLA-II ligand predictor.☆35Updated last year
- 3D hotspot mutation proximity analysis tool☆45Updated last year