HCBravoLab / metagenomeFeaturesLinks
R package for annotating metagenomic datasets with taxonomic information
☆10Updated 5 years ago
Alternatives and similar repositories for metagenomeFeatures
Users that are interested in metagenomeFeatures are comparing it to the libraries listed below
Sorting:
- SEQprocess: a modularized and customizable pipeline framework for NGS processing in R package☆17Updated 5 years ago
- Interactive Differential Expression AnaLysis - DE made accessible and reproducible☆31Updated 6 months ago
- This repo contains the code for a shiny app that allows for visualization of subset phylogenetic trees☆15Updated 6 years ago
- Seamless navigation through combined results of set-based and network-based enrichment analysis☆21Updated 2 months ago
- 16S rRNA Sequencing Data from the Human Microbiome Project☆10Updated 2 weeks ago
- ☆20Updated 2 weeks ago
- ☆10Updated 6 years ago
- R interface to 'Gos'☆39Updated 2 years ago
- R interface to megadepth: BigWig and BAM related utilities☆12Updated 11 months ago
- TOP results by CONfident efFECT Sizes.☆14Updated 11 months ago
- Workshop on tidytranscriptomics: Performing tidy transcriptomics analyses with tidybulk, tidyverse and tidyheatmap☆26Updated 5 years ago
- Open-Source Software for Omic Data Analysis and Visualization☆40Updated this week
- Do microbiome analysis with dada2 and phyloseq object☆14Updated last year
- integrative pathway analysis with modern PCA methodology and gene selection☆11Updated 2 years ago
- Targeted and non-targeted anticancer drugs and drug regimens☆29Updated last week
- ☆20Updated 2 years ago
- RNA-seq for Mendelian disease diagnostics: A hands-on tutorial through bioinformatic tools and workflows☆17Updated 3 years ago
- ☆12Updated 8 years ago
- Machine learning use cases for teaching☆13Updated 8 years ago
- An R-based approach for preprocessing and aligning 16S, metagenomic, and metatranscriptomic data (PathoScope version 3.0)☆20Updated last week
- 📊 An R package of RNA-seq workflow☆15Updated 3 years ago
- METAgenomic LONgitudinal Differential Abundance method☆16Updated 5 years ago
- NOTE: This package has been renamed to sparrow and will be submitted to Bioconductor 3.14. Please use that package instead. This is kept …☆21Updated 5 years ago
- RNA-seq quantifications: gene expression responses to human rhinovirus infection for 6 asthmatic and 6 non-asthmatic donors (SRP046226)☆19Updated 7 years ago
- Molecular Signatures Database (MSigDB) in a data frame☆16Updated 6 years ago
- Drawing 'dendrogram' using 'ggtree'☆13Updated 2 weeks ago
- A comprehensive and customizable R package for microbiome analysis.☆23Updated 3 months ago
- iMAP v1.0 (Pre-release): Integrated Microbiome Analysis Pipeline☆13Updated last year
- R package to wrap cBioPortal's API to pull data from public or private cBioPortal databases☆23Updated 11 months ago
- HGNC Comparison of Orthology Predictions (HCOP)☆14Updated 7 years ago