Alternatives and similar repositories for mitoClone:

Users that are interested in mitoClone are comparing it to the libraries listed below

• GreenleafLab / ChrAccR
  Analyzing chromatin accessibility data in R
  ☆18Updated last year
• csglab / GEDI
  Gene Expression Decomposition and Integration
  ☆17Updated 2 months ago
• dbrg77 / ISSAAC-seq
  ☆17Updated 2 years ago
• MarioniLab / oor_design_reproducibility
  ☆15Updated last year
• caleblareau / maegatk
  Mitochondrial Alteration Enrichment and Genome Analysis Toolkit
  ☆19Updated last year
• mardzix / bcd_nano_CUTnTag
  ☆11Updated last year
• yizhak-lab-ccg / RNA_MUTECt_WMN
  ☆23Updated 2 years ago
• Vivianstats / scINSIGHT
  Matrix factorization model for interpreting single cell gene expression in biologically heterogeneous data
  ☆21Updated last year
• cole-trapnell-lab / pseudospace
  ☆12Updated 5 years ago
• OSCA-source / OSCA.advanced
  Advanced steps of the OSCA book
  ☆13Updated 2 weeks ago
• bioinfo-biols / Code_for_circSC
  Analysis pipeline for our circSC manuscript
  ☆13Updated 2 years ago
• data2intelligence / CytoSig_prediction
  Example of run CytoSig and reproduce prediction results on bulk and single-cell cohorts
  ☆12Updated last year
• single-cell-genetics / singlecell_neuroseq_paper
  Population-scale single-cell RNA-seq profiling across dopaminergic neuron differentiation
  ☆21Updated 10 months ago
• davemcg / scEiaD
  Snakefile-based process to turn 1.4 million ocular cells into a unified meta-atlas
  ☆25Updated last year
• jiang-junyao / CACIMAR
  cross-species analysis of cell identities, markers and regulations
  ☆12Updated last month
• MarioniLab / geneBasisR
  R package for gene selection using k-NN graphs.
  ☆13Updated last year
• powellgenomicslab / ascend
  Analysis of Single Cell Expression, Normalization and Differential expression
  ☆12Updated 5 years ago
• bjstewart1 / kidney_sc_immune
  Repository for scRNAseq study of human kidneys
  ☆15Updated 5 years ago
• natsuhiko / PHM
  Pairwise Hierarchical Model
  ☆17Updated 3 years ago
• vincenthahaut / FLASH-Seq
  ☆10Updated 2 years ago
• crazyhottommy / scCustomize
  Collection of functions created and/or curated to aid in the visualization and analysis of single-cell data using R.
  ☆16Updated 3 years ago
• tanaylab / embflow
  ☆12Updated 2 years ago
• PoolLab / ReferenceEnhancer
  ☆20Updated last year
• TheJacksonLaboratory / BRCA-LRseq-pipeline
  Pipeline to analyze long-read mRNA isoforms and ORF products sequenced in breast cancer using PacBio Single-Molecule technology.
  ☆14Updated 2 years ago
• secrierlab / EMT
  This repository contains code for the evaluation of epithelial-to-mesenchymal transition states in cancer.
  ☆12Updated 2 years ago
• jacobhepkema / scover
  scover
  ☆23Updated last year
• mvanins / scRiboSeq_manuscript
  ☆10Updated 3 years ago
• soumelis-lab / ICELLNET
  ☆20Updated last year
• inmybrain / SClineager
  SClineager: a Bayesian hierarchical model that performs lineage tracing of single cells based on genetic markers
  ☆10Updated last year
• Dingpw / Endothelial-Cell-Heterogeneity-and-Microglia-Regulons-Revealed-by-A-Pig-Cell-Landscape-at-Single-cel
  ☆15Updated 2 years ago