Alternatives and similar repositories for mitoClone

Users that are interested in mitoClone are comparing it to the libraries listed below

• GreenleafLab / ChrAccR
  Analyzing chromatin accessibility data in R
  ☆18Updated 2 years ago
• MarioniLab / oor_design_reproducibility
  ☆16Updated 2 years ago
• dbrg77 / ISSAAC-seq
  ☆17Updated 2 years ago
• yizhak-lab-ccg / RNA_MUTECt_WMN
  ☆25Updated 3 years ago
• tanaylab / embflow
  ☆12Updated 2 years ago
• csglab / GEDI
  Gene Expression Decomposition and Integration
  ☆19Updated 7 months ago
• caleblareau / maegatk
  Mitochondrial Alteration Enrichment and Genome Analysis Toolkit
  ☆22Updated last year
• juliaolivieri / SpliZ_pipeline
  Code to calculate the Splicing Z Score (SpliZ) for single cell RNA-seq splicing analysis
  ☆34Updated 3 years ago
• jacobhepkema / scover
  scover
  ☆23Updated last year
• ChenWeiyan / LandSCENT
  Landscape Single Cell Entropy
  ☆20Updated 5 years ago
• Vivianstats / scINSIGHT
  Matrix factorization model for interpreting single cell gene expression in biologically heterogeneous data
  ☆22Updated last year
• ati-lz / HCA_Benchmarking
  This repository contains HCA Benchmarking codes
  ☆26Updated 5 years ago
• davemcg / scEiaD
  Snakefile-based process to turn 1.4 million ocular cells into a unified meta-atlas
  ☆26Updated last year
• kostkalab / vaeda
  Vaeda method for computational doublet annotation
  ☆17Updated last year
• CyrilLagger / scDiffCom
  Difference in Intercellular Communication from scRNA-seq data
  ☆22Updated last year
• BoevaLab / ANS_signature_scoring
  ANS_signature_scoring: A gene expression signature scoring Python package.
  ☆16Updated 2 weeks ago
• aet21 / EpiSCORE
  Epigenetic cell-type deconvolution from Single-Cell Omic Reference profiles
  ☆33Updated 6 months ago
• hsmaan / Iniquitate
  Analysis of imbalanced data and its impacts in a scRNA-seq integration setting
  ☆30Updated 6 months ago
• PoolLab / ReferenceEnhancer
  ☆20Updated 2 years ago
• SchulzLab / STARE
  TF analysis from epigenetic and Hi-C data
  ☆18Updated 6 months ago
• leeprichman / ClonoCluster
  Combined clonality and transcriptome scRNAseq clustering method
  ☆11Updated 2 years ago
• AdelmanLab / NIH_scripts
  A collection of perl scripts for NGS analysis
  ☆16Updated last year
• kjgaulton / pipelines
  Analytical tools and pipelines for bulk and single cell epigenomic and human genetic data
  ☆27Updated 4 years ago
• harbourlab / PieParty
  represent each cell in UMAP plots as a pie chart
  ☆16Updated 4 years ago
• mardzix / bcd_nano_CUTnTag
  ☆12Updated last year
• secrierlab / EMT
  This repository contains code for the evaluation of epithelial-to-mesenchymal transition states in cancer.
  ☆13Updated 2 years ago
• cole-trapnell-lab / pseudospace
  ☆12Updated 6 years ago
• FertigLab / pycogaps
  python API to the CoGAPS NMF package
  ☆19Updated 4 months ago
• LaughneyLab / ContactTracing_tutorial
  ☆17Updated last year
• soumelis-lab / ICELLNET
  ☆20Updated 2 months ago