Alternatives and similar repositories for AG2PI_GWAS_workshop_June2021

Users that are interested in AG2PI_GWAS_workshop_June2021 are comparing it to the libraries listed below

• swvanderlaan / GWASToolKit
  A collection of scripts to run GWAS, regional, gene-oriented, or per-variant analyses.
  ☆18Updated 7 months ago
• JaeYoonKim72 / GMStool
  ☆16Updated 4 years ago
• Bioconductor / GenomicFeatures
  Query the gene models of a given organism/assembly
  ☆27Updated last week
• lucieabergeron / vertebrate_rate
  Method used in the study on germline mutation rate estimation in 68 species of vertebrates.
  ☆14Updated 3 years ago
• guokai8 / VennDetail
  VennDetail: a bioconductor package for VennDiagram visualization and details extraction
  ☆29Updated last month
• YTLogos / BnaSNPDB
  An interactive web portal for exploring SNPs among 1,007 rapeseed germplasm accessions
  ☆13Updated 3 months ago
• schatzlab / scikit-ribo
  Accurate estimation and robust modelling of translation dynamics at codon resolution
  ☆20Updated 7 years ago
• sanjaynagi / rna-seq-pop
  Snakemake workflow for Illumina RNA-sequencing experiments - extract population genomic signals from RNA-Seq data
  ☆18Updated 2 months ago
• mdozmorov / RNA-seq
  RNA-seq analysis scripts
  ☆15Updated last month
• GuangchuangYu / plotting_tree_with_data
  Two methods for mapping and visualizing associated data on phylogeny using ggtree
  ☆12Updated 6 years ago
• knausb / vcfR_documentation
  Documentation for vcfR
  ☆11Updated 3 weeks ago
• dmiller903 / CompoundHetVIP
  A pipeline for the identification of Compound Heterozygous Variants
  ☆9Updated 2 years ago
• NBISweden / workshop-mlbiostatistics
  ☆16Updated this week
• guigolab / bamstats
  A command line tool to compute mapping statistics from a BAM file
  ☆24Updated 3 years ago
• SFUStatgen / LDheatmap
  ☆16Updated 2 years ago
• amkusmec / FarmCPUpp
  Perform GWAS using the FarmCPU model.
  ☆23Updated 5 months ago
• cougarlj / COMPSRA
  COMPSRA: a COMprehensive Platform for Small RNA-Seq data Analysis
  ☆16Updated 4 years ago
• JD2112 / methylr
  methylR: a single shiny solution from sequencer data to pathway analysis
  ☆12Updated 7 months ago
• naumenko-sa / bioscripts
  a bucket of bioinformatics scripts
  ☆13Updated this week
• Shicheng-Guo / HowtoBook
  Readme
  ☆10Updated 5 years ago
• LewisLabUCSD / NGS-Pipeline
  All kinds of NGS analysis pipeline
  ☆12Updated 5 years ago
• sguizard / DensityMap
  DensityMap is perl tool for the visualization of features density along chromosomes
  ☆17Updated 3 years ago
• YaoLab-Bioinfo / MaizeSNPDB
  A comprehensive database for efficient retrieve and analysis of SNPs among 1210 maize lines
  ☆13Updated 2 years ago
• YuLab-SMU / MicrobiomeProfiler
  A shiny package for microbiome functional enrichment analysis
  ☆37Updated last month
• rcastelo / atena
  Analysis of transposable elements
  ☆10Updated last week
• mrcuizhe / interacCircos
  An R Package based on JavaScript libraries for Visualization of Interactive Circos Plot
  ☆26Updated 2 years ago
• YTLogos / ttplot
  Tao Yan's Plot Toolkit
  ☆12Updated 5 years ago
• zhongw2 / GeneTEFlow
  ☆23Updated 4 years ago
• rli012 / BioinfoHub
  ☆12Updated 3 years ago
• cxli233 / ggtraces
  A tidyverse and grammar of graphics powered line traces visualizer
  ☆30Updated 10 months ago