An R package of High-resolution Informatics Toolbox for Maldi-imaging Proteomics
☆19Oct 2, 2025Updated 5 months ago
Alternatives and similar repositories for HiTMaP
Users that are interested in HiTMaP are comparing it to the libraries listed below
Sorting:
- Code for 'Topological and kernel-based microbial phenotype prediction from MALDI-TOF mass spectra'☆11Apr 11, 2022Updated 3 years ago
- Mass spectrometry imaging toolbox☆71Feb 12, 2026Updated last month
- ☆46Mar 14, 2025Updated last year
- Cloud engine and platform for metabolite annotation for imaging mass spectrometry☆57Updated this week
- MAss spectra alignment tool for MSI data☆20Jun 6, 2022Updated 3 years ago
- Reference pipeline for FDR-controlled metabolite annotation for imaging mass spectrometry☆21Nov 15, 2016Updated 9 years ago
- collection of mass spectrometry imaging workflows☆22Updated this week
- A Bioconductor R package - Automated Evaluation of Precursor Ion Purity for Mass Spectrometry Based Fragmentation in Metabolomics☆16Mar 12, 2026Updated last week
- rapid serotyping of Vibrio parahaemolyticus from whole genome sequencing data using serogroup-specific genes☆10Sep 2, 2021Updated 4 years ago
- rMSI processing methods using C++☆11Dec 3, 2021Updated 4 years ago
- Initial recommendations for performing, benchmarking, and reporting single-cell proteomics experiments. The code is distributed under an …☆12Apr 5, 2023Updated 2 years ago
- Repository for the Broad Institute Proteogenomic Data Analysis Center (PGDAC) established by the NIH Clinical Proteomics Tumor Analysis C…☆38Feb 10, 2026Updated last month
- Single cell proteomics data processing☆30Feb 9, 2026Updated last month
- Toolbox for the processing and analysis of MALDI-MSI data☆15Sep 10, 2025Updated 6 months ago
- ☆14Dec 27, 2022Updated 3 years ago
- Data hub and data tool repository related to the NIST PFAS Program.☆12Sep 26, 2024Updated last year
- R package for analysing proteomics data☆50Apr 17, 2023Updated 2 years ago
- The MetaRbolomics book. A review of R packages in BioC, CRAN, gitlab and github.☆34Mar 23, 2021Updated 4 years ago
- AlphaFind: Discover structure similarity across the entire known proteome☆25Nov 5, 2025Updated 4 months ago
- ☆11Feb 5, 2024Updated 2 years ago
- A python package for protein inference in Mass Spectrometric data analysis.☆10Jun 6, 2022Updated 3 years ago
- R package for MetFrag☆24Sep 25, 2017Updated 8 years ago
- Lithops-based Serverless implementation of the METASPACE spatial metabolomics annotation pipeline☆12Jul 6, 2023Updated 2 years ago
- A Tool for automated Optimization of XCMS Parameters☆34Nov 27, 2022Updated 3 years ago
- Using Biological Signals for Mass Recalibration of Mass Spectrometry Imaging Data☆11Dec 10, 2021Updated 4 years ago
- A Python wrapper for alvaDesc software☆10Oct 15, 2024Updated last year
- ☆13Sep 29, 2023Updated 2 years ago
- ☆17Sep 28, 2022Updated 3 years ago
- COSMOS (Causal Oriented Search of Multi-Omic Space) is a method that integrates phosphoproteomics, transcriptomics, and metabolomics data…☆66Mar 12, 2026Updated last week
- supplementary tables and files☆10Oct 13, 2023Updated 2 years ago
- ProtGraph - A Graph-Generator for Proteins☆13Mar 4, 2026Updated 2 weeks ago
- a toolbox for metabolomic data analysis, visualization and ‘omic’ integration☆13Jun 21, 2018Updated 7 years ago
- An open-source Python package for efficient accession and visualization of Bruker TimsTOF raw data from the Mann Labs at the Max Planck I…☆94Updated this week
- 📈A 'ggplot2' Extension for Visualizing Density, Distribution, Hazard, or Survival Functions using the 'logspline' Package☆12Jun 18, 2019Updated 6 years ago
- ☆16Sep 13, 2024Updated last year
- Creating Circular Graph with the Grammar of GGplot2☆22Jan 5, 2024Updated 2 years ago
- Some hopefully useful tools for mass spectrometry applied to proteomics☆53Oct 12, 2021Updated 4 years ago
- mzTab Reporting MS-based Proteomics and Metabolomics Results☆45Apr 1, 2025Updated 11 months ago
- ImageJ/Fiji plugin to skeletonize binary images☆18Jun 14, 2022Updated 3 years ago