Alternatives and similar repositories for HiTMaP

Users that are interested in HiTMaP are comparing it to the libraries listed below

• fgcz / prolfqua
  Differential Expression Analysis tool box R lang package for omics data
  ☆44Updated last week
• Vitek-Lab / MSstatsShiny
  R-Shiny GUI integrated with the MSstats package family
  ☆15Updated last month
• jaspershen / metID
  Construct database and identify metabolites.
  ☆6Updated 2 years ago
• kuwisdelu / Cardinal
  Mass spectrometry imaging toolbox
  ☆59Updated 6 months ago
• cpanse / protViz
  Visualizing and Analyzing Mass Spectrometry Related Data in Proteomics
  ☆11Updated last month
• pnnl / leapR
  ☆17Updated 2 weeks ago
• MonashBioinformaticsPlatform / LFQ-Analyst
  The repo for LFQ-Analyst
  ☆30Updated 11 months ago
• rformassspectrometry / metaRbolomics-book
  The MetaRbolomics book. A review of R packages in BioC, CRAN, gitlab and github.
  ☆33Updated 4 years ago
• ComputationalProteomics / NormalyzerDE
  Tools for normalization, evaluation of outliers, technical biases and batch effects and differential expression analysis.
  ☆24Updated last month
• rformassspectrometry / QFeatures
  Quantitative features for mass spectrometry data
  ☆27Updated last month
• Vitek-Lab / MSstatsTMT
  R-based package for detecting differentially abundant proteins in shotgun mass spectrometry-based proteomic experiments with tandem mass …
  ☆29Updated 3 weeks ago
• const-ae / proDA
  Protein Differential Abundance for Label-Free Mass Spectrometry https://const-ae.github.io/proDA/
  ☆20Updated last year
• broadinstitute / PANOPLY
  Repository for the Broad Institute Proteogenomic Data Analysis Center (PGDAC) established by the NIH Clinical Proteomics Tumor Analysis C…
  ☆37Updated last week
• tidymass / tidymass
  tidymass
  ☆56Updated 2 months ago
• ipb-halle / MetFragR
  R package for MetFrag
  ☆24Updated 7 years ago
• sneumann / mzR
  This is the git repository matching the Bioconductor package mzR: parser for netCDF, mzXML, mzData and mzML files (mass spectrometry data…
  ☆45Updated 5 months ago
• prafols / rMSIproc
  rMSI processing methods using C++
  ☆11Updated 3 years ago
• jpquast / protti
  Picotti lab data analysis package.
  ☆62Updated 3 months ago
• lgatto / RforProteomics
  Using R and Bioconductor packages for the analysis and comprehension of proteomics data.
  ☆93Updated 2 years ago
• yafeng / DEqMS
  DEqMS is a tool for quantitative proteomic analysis
  ☆23Updated 3 months ago
• YanglabWCH / StatsPro
  StatsPro : systematic integration and evaluation of statistical approaches for detecting differential expression in label-free quantitat…
  ☆13Updated 3 years ago
• bartongroup / Proteus
  R package for analysing proteomics data
  ☆49Updated 2 years ago
• broadinstitute / protigy
  Proteomics Toolset for Integrative Data Analysis
  ☆24Updated 3 months ago
• pmartR / pmartR
  The pmartR R package provides functionality for quality control, normalization, exploratory data analysis, and statistical analysis of ma…
  ☆43Updated last week
• wangshisheng / NAguideR
  NAguideR: performing and prioritizing missing value imputations for consistent bottom-up proteomic analyses
  ☆47Updated last month
• shuzhao-li-lab / espol-workshop
  5-day workshop on Metabolomics and Data Analysis
  ☆16Updated 5 years ago
• arnesmits / DEP
  DEP package
  ☆28Updated 2 years ago
• jeffsocal / tidyproteomics
  An S3 data object and framework for common quantitative proteomic analyses
  ☆42Updated last month
• Vitek-Lab / MSstats
  R package - MSstats
  ☆83Updated last week
• saezlab / cosmosR
  COSMOS (Causal Oriented Search of Multi-Omic Space) is a method that integrates phosphoproteomics, transcriptomics, and metabolomics data…
  ☆61Updated last week