repseqio / library-imgt
IMGT segment library converted to RepSeq.IO JSON format
☆13Updated last year
Alternatives and similar repositories for library-imgt:
Users that are interested in library-imgt are comparing it to the libraries listed below
- IGoR is a C++ software designed to infer V(D)J recombination related processes from sequencing data. Find full documentation at:☆51Updated 2 years ago
- MAGERI - Assemble, align and call variants for targeted genome re-sequencing with unique molecular identifiers☆21Updated 7 years ago
- A bioinformatics tool for SV detection and virus integration discovery☆20Updated 7 years ago
- Toolkit for the design and analysis of amplicon sequencing experiments utilizing unique molecular identifiers (UMIs)☆41Updated 8 months ago
- Bioinformatic pipeline for identifying dsDNA breaks by marker based incorporation, such as breaks induced by designer nucleases like Cas9…☆21Updated last month
- Assembly of RNA reads to determine the effect of a cancer mutation on protein sequence☆25Updated 3 months ago
- A Computational Workflow for Designing Libraries of sgRNAs for CRISPR-Mediated Base Editing, and much more☆19Updated 8 months ago
- Versatile FASTA/FASTQ demultiplexer.☆32Updated 8 months ago
- Tool package to perform in-silico CRISPR analysis and assessment☆22Updated 8 months ago
- Detection of Circular RNA and Fusions from RNA-Seq☆32Updated 6 years ago
- Calib clusters barcode tagged paired-end reads based on their barcode and sequence similarity.☆38Updated last year
- A novel PSSM based software for predicting class I peptide-HLA binding affinity☆17Updated 7 years ago
- ☆15Updated last year
- ☆14Updated 2 years ago
- V'DJer - B Cell Receptor Repertoire Reconstruction from short read mRNA-Seq data☆29Updated 2 years ago
- Haplotype, isoform and gene level expression analysis using multi-mapping RNA-seq reads☆68Updated 10 months ago
- This script use to analyze the immune repertoire sequenced by high throughtput sequencing☆24Updated 3 years ago
- ChIP-seq DC and QC Pipeline☆34Updated 3 years ago
- A guide to running MaxQuant in Linux☆32Updated 4 years ago
- Pipeline for identifying viral integration and fusion mRNA reads from NGS data. Manuscript is currently in preparation.☆27Updated 3 years ago
- simplified cellranger for long-read data☆17Updated 4 months ago
- Identifying genome-wide translated open reading frames using ribosome profiling☆21Updated last year
- Pipeline to detect HLA disruption from WES and RNAseq data☆16Updated 3 weeks ago
- HLA typing for Sanger Based Test☆17Updated last year
- ImReP is a computational method for rapid and accurate profiling of the adaptive immune repertoire from regular RNA-Seq data.☆28Updated 5 years ago
- Detecting somatic mutations and predicting tumor-specific neo-antigens☆28Updated 3 years ago
- optimization of ribosome P-site positioning in ribosome profiling data☆46Updated last year
- ☆47Updated 2 years ago
- SpecHLA reconstructs entire diploid sequences of HLA genes and infers LOH events. It supports HLA-A, -B, -C, -DPA1, -DPB1, -DQA1, -DQB1, …☆40Updated 4 months ago
- direct comparison of circular and linear RNA expression☆20Updated 4 years ago