Xiang-HF-Zhang / Dichotomous-of-innate-immune-landscapeLinks
Dichotomous of innate immune landscape
☆17Updated 6 years ago
Alternatives and similar repositories for Dichotomous-of-innate-immune-landscape
Users that are interested in Dichotomous-of-innate-immune-landscape are comparing it to the libraries listed below
Sorting:
- Repository containing all code for secondary analysis in the manuscript "On the design of CRISPR-based single cell molecular screens", Hi…☆26Updated 3 years ago
- Immune Cell Gene Signatures for Profiling the Microenvironment of Solid Tumours☆27Updated 4 years ago
- Collection of functions created and/or curated to aid in the visualization and analysis of single-cell data using R.☆16Updated 3 years ago
- scTyper: a comprehensive pipeline for the cell typing analysis of single-cell RNA-seq data☆31Updated 2 years ago
- This repo contains the code necessary to reproduce the clusters found in "The Immune Landscape of Cancer".☆18Updated 6 years ago
- Code for the manuscript "Single-cell analysis of human primary prostate cancer reveals the heterogeneity of tumor-associated epithelial c…☆23Updated 3 years ago
- TIGS (Tumor Immunogenicity Score) project https://doi.org/10.7554/eLife.49020☆32Updated 4 years ago
- ☆47Updated 5 years ago
- Pseudotime Analysis for Bulk Data☆16Updated last year
- ☆47Updated 8 months ago
- This repository contains HCA Benchmarking codes☆26Updated 5 years ago
- Bioconductor package esATAC: an Easy-to-use Systematic pipeline for ATAC-seq data analysis☆23Updated 3 years ago
- ☆30Updated 7 years ago
- Public code repository for the Banovich Lab at the Translational Genomics Research Institute (TGen).☆46Updated last year
- Epigenetic cell-type deconvolution from Single-Cell Omic Reference profiles☆33Updated 5 months ago
- Pipeline for characterizing metebolic heterogeneity from single-cell RNA-seq data☆22Updated 3 years ago
- ConsensusTME Gene Sets and R Script☆39Updated last year
- Code accompanying Characterizing genetic intra-tumor heterogeneity across 2,658 human cancer genomes☆43Updated 4 years ago
- Machine learning algorithm to predict biological pathway relationships based on functional genomics networks☆20Updated 7 years ago
- This repository contains code for the evaluation of epithelial-to-mesenchymal transition states in cancer.☆13Updated 2 years ago
- ☆58Updated last year
- Validating glioblastoma immune cell immunohistochemsitry using computational deconvolution of TCGA tumors☆14Updated 6 years ago
- Repo for website and other code for mouse sci-ATAC-seq project☆28Updated 4 years ago
- Gene set enrichment analysis for single-cell RNAseq data☆28Updated 2 years ago
- Reproducibility repository accompanying Wilk, Rustagi, Zhao, et al. "A single-cell atlas of the peripheral immune response to severe COVI…☆49Updated 3 years ago
- Multi-omics profiling of peripheral immune system response to SARS-CoV-2 infection☆41Updated 3 years ago
- Calculating Tumor microenvironment score☆29Updated 2 years ago
- ☆13Updated 7 years ago
- ☆18Updated last year
- Immune evasion before tumor invasion in early squamous lung cell carcinogenesis☆16Updated 4 years ago