lrgr / multifactorial-immune-response
Multifactorial modeling of response to checkpoint inhibitor immunotherapy from tumor, immune, and clinical features
☆14Updated 6 years ago
Alternatives and similar repositories for multifactorial-immune-response:
Users that are interested in multifactorial-immune-response are comparing it to the libraries listed below
- Search public databases for given genotypic information☆11Updated 7 years ago
- OmicSelector - Environment, docker-based application and R package for biomarker signiture selection (feature selection) & deep learning …☆35Updated 4 months ago
- Short course using RStudio for biological data analysis☆14Updated 2 years ago
- GECO (Gene Expression Clustering Optimization; theGECOapp.com) is a minimalistic GUI app that utilizes non-linear reduction techniques to…☆9Updated last year
- Monet: An open-source Python package for analyzing scRNA-Seq data using PCA-based latent spaces☆39Updated 3 years ago
- User-submitted RNA-seq data analysis tools for BioJupies.☆20Updated 4 years ago
- TCGA data acquisition and processing for Project Cognoma☆20Updated 6 years ago
- Immunology Informatics - Big Data Analysis in Immunology - Tutorials☆21Updated 7 years ago
- R package for the identification of cancer-associated mutated genes using gene expression and mutation data.☆10Updated 3 years ago
- PyIOmica (pyiomica) is a Python package for omics analyses.☆15Updated 2 years ago
- R package with netDx software and data for examples☆12Updated 2 years ago
- deep learning toolkit (written on top of tensorflow) to streamline computational biology analysis☆23Updated 2 years ago
- Base-pair resolution detection of transcription factor binding site by deep deconvolutional network☆10Updated 7 years ago
- 🔬 R package: Analysis of Large Affymetrix Microarray Data Sets☆10Updated 2 weeks ago
- ShinyLearner: a software framework for performing benchmarks of machine-learning classification algorithms☆18Updated 3 years ago
- Distinguishing between generic and experiment-specific gene expression signals.☆12Updated 2 years ago
- ☆10Updated 3 years ago
- Literature mining for T cell relations☆23Updated 2 years ago
- MEXPRESS is a data visualization tool designed for the visualization of TCGA expression, DNA methylation and clinical data.☆13Updated 4 years ago
- ☆16Updated 4 years ago
- The Pathway Interaction Database (PID) is software supporting the access and display of information about bio-molecular interactions and …☆15Updated 9 years ago
- The Cancer bioMarker Prediction Pipeline (CAMPP)☆17Updated 4 years ago
- MuSiCa - Mutational Signatures in Cancer☆23Updated last year
- End-to-End learning framework for circular RNA classification from other long non-coding RNA using multimodal deep learning☆23Updated 5 years ago
- Collection of scripts for pre- and postprocessing neoantigen discovery calls.☆9Updated 5 years ago
- ☆19Updated 4 years ago
- Large-scale automatic feature selection for biomarker discovery in high-dimensional OMICs data☆29Updated 11 months ago
- Compute a 2D embedding of a data matrix given supervised class information.☆12Updated 5 years ago
- Data Integration tool utilizing network information for predictive analyses☆16Updated last year
- Data stories☆10Updated 6 years ago