jinworks / scAB
scAB detects multiresolution cell states with clinical significance
☆14Updated 2 years ago
Related projects ⓘ
Alternatives and complementary repositories for scAB
- ☆22Updated last year
- HCC single cell analysis for Alvarez, Benhammou et al.☆16Updated 2 years ago
- ☆31Updated 8 months ago
- Hierarchical Cell Annotation☆15Updated this week
- ☆19Updated 7 months ago
- ☆17Updated 10 months ago
- 🐯 tigeR: Tumor Immunotherapy Gene Expression Data Analysis R package☆28Updated 5 months ago
- Data available at: https://www.dropbox.com/sh/jh4s57kgbb0rnxe/AABoMK466cGc1OKsOuFN10wca?dl=0 and https://nyulangone-my.sharepoint.com//g/…☆26Updated 2 years ago
- ☆34Updated 2 years ago
- Method for de novo mutation calling from droplet based single cell RNA seq data☆12Updated 3 years ago
- ☆17Updated 3 years ago
- ☆16Updated 8 months ago
- ☆14Updated last year
- ☆17Updated last year
- MultiK is a data-driven tool that objectively assesses the optimal number(s) of clusters based on the concept of consensus clustering via…☆21Updated last year
- Unsupervised Inference of Developmental Directions for Single Cells☆21Updated 10 months ago
- Spatial transcriptomics of heart tissue☆17Updated 2 years ago
- ☆11Updated last year
- Code used to run the data analysis in the hdWGCNA manuscript (Morabito et al 2022)☆13Updated last year
- Gene set enrichment analysis for single-cell RNAseq data☆28Updated last year
- Human Endometrial Cell Atlas (HECA). An integrated single-cell reference atlas of the human endometrium.☆20Updated 5 months ago
- ☆15Updated last year
- ☆12Updated last year
- R code used to analyze single cell PDAC data☆30Updated 4 months ago
- ☆13Updated last year
- ☆42Updated 4 years ago
- An R shiny based tool used for single cell RNA-seq data visualization and analysis.☆32Updated 3 years ago
- Robust identification of perturbed cell types in single-cell RNA-seq data☆26Updated this week
- NEPAL is to calculate neuroendocrine (NE) risk score from bulk and single-cell transcriptomics of both human and mouse prostate cancer (P…☆11Updated 6 months ago
- code for data processing and visualisation associated with the stromal subclasses manuscript☆11Updated 4 years ago