jinworks / scABLinks
scAB detects multiresolution cell states with clinical significance
☆17Updated 2 years ago
Alternatives and similar repositories for scAB
Users that are interested in scAB are comparing it to the libraries listed below
Sorting:
- Hierarchical Cell Annotation☆20Updated 7 months ago
- NEPAL is to calculate neuroendocrine (NE) risk score from bulk and single-cell transcriptomics of both human and mouse prostate cancer (P…☆12Updated last year
- 🐯 tigeR: Tumor Immunotherapy Gene Expression Data Analysis R package☆33Updated 3 weeks ago
- ☆16Updated last year
- Calculate NEPC risk score from bulk transcriptome data or single-cell RNA-seq for prostate cancer☆14Updated 6 months ago
- ☆22Updated 2 years ago
- HCC single cell analysis for Alvarez, Benhammou et al.☆16Updated 3 years ago
- The source code of web server TIP, including example data.☆19Updated 6 years ago
- Spatial transcriptomics of heart tissue☆22Updated 3 years ago
- Unsupervised Inference of Developmental Directions for Single Cells☆21Updated last year
- Code used to run the data analysis in the hdWGCNA manuscript (Morabito et al 2022)☆16Updated last year
- ☆37Updated 2 years ago
- ☆21Updated last year
- An R package for drug response prediction and drug-gene association prediction.☆18Updated last month
- ☆17Updated last year
- ☆17Updated last year
- Data available at: https://www.dropbox.com/sh/jh4s57kgbb0rnxe/AABoMK466cGc1OKsOuFN10wca?dl=0 and https://nyulangone-my.sharepoint.com//g/…☆30Updated 2 years ago
- ☆12Updated 5 months ago
- Visualize the results of cell-cell communication analysis☆22Updated 2 years ago
- Code used to process the data of the HBCA project☆28Updated last year
- ☆16Updated 4 years ago
- ☆30Updated 4 months ago
- Deconvolution of spatial transcriptomics at single-cell resolution☆18Updated 9 months ago
- Calculating Tumor microenvironment score☆29Updated 2 years ago
- ☆20Updated last year
- Robust identification of perturbed cell types in single-cell RNA-seq data☆31Updated 7 months ago
- ☆18Updated 3 years ago
- cell type deconvolution for multi-condition bulk RNA-seq data☆26Updated 3 years ago
- Code for the manuscript "Single-cell analysis of human primary prostate cancer reveals the heterogeneity of tumor-associated epithelial c…☆22Updated 3 years ago
- ☆13Updated 7 years ago