zhengtaoxiao / Single-Cell-Metabolic-LandscapeLinks
Pipeline for characterizing metebolic heterogeneity from single-cell RNA-seq data
☆22Updated 3 years ago
Alternatives and similar repositories for Single-Cell-Metabolic-Landscape
Users that are interested in Single-Cell-Metabolic-Landscape are comparing it to the libraries listed below
Sorting:
- scWGCNA☆61Updated 2 years ago
- Public code repository for the Banovich Lab at the Translational Genomics Research Institute (TGen).☆46Updated last year
- ☆63Updated 4 years ago
- ☆58Updated last year
- A portable and fast single cell type identifier☆64Updated 4 years ago
- Single cell RNA-seq analysis bundle☆35Updated 5 years ago
- Single cell RNA analysis about paper “Caloric restriction reprograms the single-cell transcriptional landscape of Rattus norvegicus aging…☆29Updated 5 years ago
- Single-cell transcriptome profiling of an adult human cell atlas of 15 major organs☆38Updated last year
- NATMI: Network Analysis Toolkit for the Multicellular Interactions☆35Updated 4 years ago
- Cluster single cells and analyze cell clade relationships with colorful visualizations.☆45Updated 4 years ago
- SCDC☆45Updated 2 months ago
- Inferring CNV data from single cell ATAC seq☆24Updated 2 months ago
- A R package for integrated scRNA-seq data analysis using the RPCI algorithm☆44Updated last year
- Functions for single cell data analysis☆32Updated 4 years ago
- Pipeline for exploring metebolic heterogeneity at single-cell resolution☆74Updated 5 years ago
- ☆30Updated 7 years ago
- Collection of scripts for analysis of pan fetal immune atlas☆27Updated 3 years ago
- An R shiny based tool used for single cell RNA-seq data visualization and analysis.☆33Updated 4 years ago
- Repository for Cibersortx☆61Updated 4 years ago
- Multi-omics profiling of peripheral immune system response to SARS-CoV-2 infection☆41Updated 3 years ago
- ☆50Updated 5 years ago
- Reproducibility repository accompanying Wilk, Rustagi, Zhao, et al. "A single-cell atlas of the peripheral immune response to severe COVI…☆49Updated 3 years ago
- All software used for “Decoding human fetal liver haematopoiesis” (Popescu, Botting, Stephenson et al., 2019).☆39Updated 5 years ago
- An R toolkit for estimation of cell composition from bulk expression data☆77Updated 2 months ago
- scTyper: a comprehensive pipeline for the cell typing analysis of single-cell RNA-seq data☆31Updated 2 years ago
- Coarse-graining of large single-cell RNA-seq data into metacells☆88Updated last month
- A manually curated database of literature-supported ligand-receptor interactions in human and mouse☆31Updated last year
- Capybara: A computational tool to measure cell identity and fate transitions☆59Updated 3 years ago
- ☆62Updated 6 years ago
- ☆40Updated 6 years ago