Alternatives and similar repositories for TrendCatcher

Users that are interested in TrendCatcher are comparing it to the libraries listed below

• metaOmics / metaOmics
  Shiny GUI application for genomics meta-analysis
  ☆22Updated 4 years ago
• jeffsocal / tidyproteomics
  An S3 data object and framework for common quantitative proteomic analyses
  ☆42Updated last month
• zpliulab / scGENA
  single cell Gene co-Expression Network Analysis
  ☆9Updated 2 years ago
• compgenomics / MeTDiff
  ☆14Updated 7 years ago
• kevinblighe / scDataviz
  scDataviz: single cell dataviz and downstream analyses
  ☆63Updated 3 years ago
• HelenaLC / muscat-comparison
  ☆12Updated last year
• ati-lz / HCA_Benchmarking
  This repository contains HCA Benchmarking codes
  ☆26Updated 5 years ago
• saezlab / cosmosR
  COSMOS (Causal Oriented Search of Multi-Omic Space) is a method that integrates phosphoproteomics, transcriptomics, and metabolomics data…
  ☆61Updated last week
• showteeth / GEfetch2R
  GEfetch2R - Access Single-cell/Bulk RNA-seq Data from Public Repositories and Benchmark the Subsequent Format Conversion Tools
  ☆36Updated 3 months ago
• Bioconductor / ExperimentHub
  Client to access ExperimentHub resources
  ☆10Updated last month
• junjunlab / bulkPseudotime
  Pseudotime Analysis for Bulk Data
  ☆15Updated 11 months ago
• DavisLaboratory / singscore
  An R/Bioconductor package that implements a single-sample molecular phenotyping approach
  ☆43Updated 7 months ago
• GangLiLab / genekitr
  🧬 Gene analysis toolkit based on R
  ☆57Updated 6 months ago
• RMolania / TCGA_PanCancer_UnwantedVariation
  ☆47Updated last year
• BaderLab / Cytoscape_workflows
  collection of notebooks with different cytoscape workflows
  ☆50Updated 2 years ago
• Xiang-HF-Zhang / Dichotomous-of-innate-immune-landscape
  Dichotomous of innate immune landscape
  ☆17Updated 5 years ago
• crazyhottommy / scCustomize
  Collection of functions created and/or curated to aid in the visualization and analysis of single-cell data using R.
  ☆16Updated 3 years ago
• foreverdream2 / dysfunction_interaction_test
  ☆29Updated 7 years ago
• dbdimitrov / BingleSeq
  BingleSeq - A user-friendly R package for Bulk and Single-cell RNA-Seq data analyses
  ☆22Updated 4 years ago
• ChengLiLab / SCALE
  A tissue-specific single-cell biological age model
  ☆11Updated last year
• BioinformaticsFMRP / TCGAWorkflow
  TCGA Workflow: Analyze cancer genomics and epigenomics data using Bioconductor packages
  ☆45Updated 2 years ago
• wwylab / DeMixT
  ☆36Updated 11 months ago
• aertslab / GENIE3
  GENIE3 (GEne Network Inference with Ensemble of trees) R-package
  ☆32Updated 3 years ago
• almeidasilvaf / BioNERO
  Easy and comprehensive biological network reconstruction and analysis
  ☆29Updated 9 months ago
• noriakis / CBNplot
  Bayesian network plot for the enrichment analysis results
  ☆64Updated 9 months ago
• combiz / scFlow
  Single-cell/nuclei RNA-seq analysis tools in R for a complete workflow.
  ☆56Updated last year
• crazyhottommy / scATACutils
  R/Bioconductor package for working with 10x scATACseq data
  ☆40Updated last year
• mildpiggy / DEP2
  An r package for proteomics data Analysis, developed from DEP.
  ☆30Updated 3 months ago
• olapuentesantana / easier
  R package to use EaSIeR to predict anti-tumor immune response from bulk RNA-seq
  ☆14Updated 6 months ago
• shenorrLabTRDF / bseqsc
  Bulk-Sequence Single-Cell Gene Expression Deconvolution Pipeline
  ☆45Updated 2 years ago