Japrin / STARTRACLinks
STARTRAC(Single T-cell Analysis by Rna-seq and Tcr TRACking)
☆109Updated 5 months ago
Alternatives and similar repositories for STARTRAC
Users that are interested in STARTRAC are comparing it to the libraries listed below
Sorting:
- inferring cell-cell communication from scRNA-seq of ligand-receptor☆84Updated 2 years ago
- ☆62Updated 6 years ago
- Codes used in pan-T cell analysis☆63Updated 2 years ago
- R package that automatically classifies the cells in the scRNA data by segregating non-malignant cells of tumor microenviroment from the …☆112Updated last month
- The integration of single cell rank-based gene set enrichment analysis☆133Updated 3 months ago
- Gene signature extraction and cell-identity recognition at individual cell level from single-cell RNA-seq.☆95Updated last year
- Single-cell multi-omics analysis reveals regulatory programs in clear cell renal cell carcinoma☆79Updated 11 months ago
- R package for pathway analysis in scRNA-seq data☆75Updated last year
- Pipeline for exploring metebolic heterogeneity at single-cell resolution☆74Updated 5 years ago
- Assessing the purity of single cell population☆136Updated 3 years ago
- R package for Protein activity analysis of single-cell RNAseq.☆83Updated 2 years ago
- ☆57Updated last year
- Code for reproducing the analysis in Gavish et al. "The transcriptional hallmarks of intra-tumor heterogeneity across a thousand tumors".☆126Updated last year
- Inference of cell-cell communication from single-cell RNAseq data☆48Updated 5 months ago
- ☆47Updated 3 years ago
- A tool for semi-automatic cell type harmonization and integration☆111Updated 6 months ago
- Analysis of cell-cell communication at single-cell resolution☆104Updated last year
- Mollecular Functional Portraits☆43Updated last year
- ☆31Updated 3 years ago
- Codes for the scPLC project☆68Updated 2 years ago
- ☆125Updated 3 years ago
- Methods for decontamination of single cell data☆47Updated 7 months ago
- R package for semi-supervised single-cell data integration☆90Updated last month
- A python-based package and software to predict metabolite mediated cell-cell communications by single-cell RNA-seq data☆78Updated 2 months ago
- scGSVA: Perform GSVA for single cell RNA seq☆65Updated 10 months ago
- Efficient and precise single-cell reference atlas mapping with Symphony☆110Updated 2 years ago
- Clone Calling from Visium Spatial Transcriptomics of Cancer samples☆81Updated 2 years ago
- Aligning gene expression trajectories of single-cell reference and query systems☆76Updated last month
- ☆73Updated last year
- R package to visualize gene expression data based on weighted kernel density estimation☆105Updated last year