Japrin / STARTRACLinks
STARTRAC(Single T-cell Analysis by Rna-seq and Tcr TRACking)
☆115Updated 9 months ago
Alternatives and similar repositories for STARTRAC
Users that are interested in STARTRAC are comparing it to the libraries listed below
Sorting:
- inferring cell-cell communication from scRNA-seq of ligand-receptor☆85Updated 2 years ago
- ☆65Updated 6 years ago
- The integration of single cell rank-based gene set enrichment analysis☆144Updated 3 weeks ago
- Codes used in pan-T cell analysis☆65Updated 2 years ago
- scGSVA: Perform GSVA for single cell RNA seq☆68Updated last year
- ☆60Updated last month
- Code for reproducing the analysis in Gavish et al. "The transcriptional hallmarks of intra-tumor heterogeneity across a thousand tumors".☆131Updated last year
- Single-cell multi-omics analysis reveals regulatory programs in clear cell renal cell carcinoma☆81Updated last year
- Gene signature extraction and cell-identity recognition at individual cell level from single-cell RNA-seq.☆95Updated 2 years ago
- Analysis of cell-cell communication at single-cell resolution☆106Updated last year
- Pipeline for exploring metebolic heterogeneity at single-cell resolution☆75Updated 5 years ago
- Assessing the purity of single cell population☆141Updated 3 years ago
- R package that automatically classifies the cells in the scRNA data by segregating non-malignant cells of tumor microenviroment from the …☆121Updated last month
- R package for Pathway RespOnsive GENe activity inference☆114Updated 3 years ago
- Methods for decontamination of single cell data☆56Updated 11 months ago
- SCINA: A Semi-Supervised Subtyping Algorithm of Single Cells and Bulk Samples☆74Updated 4 years ago
- Clone Calling from Visium Spatial Transcriptomics of Cancer samples☆88Updated 3 years ago
- R package for Protein activity analysis of single-cell RNAseq.☆87Updated 3 years ago
- R package for pathway analysis in scRNA-seq data☆77Updated last year
- Inference of cell-cell communication from single-cell RNAseq data☆49Updated 9 months ago
- Create stacked violin plot☆51Updated 3 years ago
- A R package for advanced single cell data viz☆73Updated 5 months ago
- R Package for Single-Cell Dataset Processing and Visualization☆66Updated 4 years ago
- R package to visualize gene expression data based on weighted kernel density estimation☆110Updated last year
- Efficient and precise single-cell reference atlas mapping with Symphony☆113Updated 3 months ago
- ☆129Updated 3 years ago
- A python-based package and software to predict metabolite mediated cell-cell communications by single-cell RNA-seq data☆78Updated 6 months ago
- Single-nuclei RNA-seq and ATAC-seq in Alzheimer's disease☆96Updated 4 years ago
- Cellular dynamics across aged human brains uncover a multicellular cascade leading to Alzheimer’s disease☆64Updated last year
- Accurate and fast cell marker gene identification with COSG☆62Updated last week