noriakis / CBNplot
Bayesian network plot for the enrichment analysis results
☆56Updated 5 months ago
Related projects: ⓘ
- Multiscale embedded gene co-expression network analysis☆48Updated 8 months ago
- 🧬 Gene analysis toolkit based on R☆53Updated last week
- Transcriptomics Visualization R package.☆56Updated 8 months ago
- Easy and comprehensive biological network reconstruction and analysis☆24Updated 5 months ago
- ☆69Updated 8 months ago
- Integrative pathway enrichment analysis of multivariate omics data☆98Updated last month
- ☆45Updated 11 months ago
- Code for the identification step for CSI-Microbes☆21Updated last month
- ☆44Updated 4 years ago
- ☆42Updated 3 weeks ago
- A pipeline for scRNA-seq data analysis☆12Updated 8 months ago
- This is a tutorial to guide the analysis of RNAseq dataset using footprint based tools such as DOROTHEA, PROGENY and CARNIVAL☆55Updated last year
- Workshop • Analysis of RNA-seq data☆33Updated 6 months ago
- ☆63Updated 2 weeks ago
- Single cell RNA-seq analysis bundle☆30Updated 5 years ago
- ☆25Updated last month
- ☆37Updated 2 years ago
- Code and analysis pipeline for Smart-seq3 (Hagemann-Jensen et al. 2020).☆49Updated 2 years ago
- Reproducibility repository accompanying Wilk, Rustagi, Zhao, et al. "A single-cell atlas of the peripheral immune response to severe COVI…☆46Updated 2 years ago
- An R interface to the MEME Suite☆43Updated 4 months ago
- 2017_2018 single cell RNA sequencing Workshop UCD_UCB_UCSF☆35Updated 6 years ago
- scDataviz: single cell dataviz and downstream analyses☆60Updated 2 years ago
- A robust and accurate cell type classifier for single cell RNA-seq data☆16Updated last year
- Compendium to "A Systematic Evaluation of Single Cell RNA-Seq Analysis Pipelines"☆53Updated 3 years ago
- Create KEGG.db Package☆58Updated last year
- Cell-Centric View of Tissue Transcriptome Measuring Cellular Compositions of Immune Microenvironment From Mouse RNA-Seq Data.☆22Updated 2 years ago
- Analysis code used in Galeano Nino et al., Impact of Intratumoral Microbiota on Spatial and Cellular Heterogeneity in human cancer. 2022☆33Updated 7 months ago
- Identify and correct invalid gene symbols☆55Updated 4 months ago
- Epimap processing and analysis code repository☆33Updated 2 years ago
- A comprehensive tool for processing, analyzing and visulizing single cell chromatin accessibility sequencing data☆68Updated last month