arc85 / singleseqgsetLinks
Gene set enrichment analysis for single-cell RNAseq data
☆30Updated 2 years ago
Alternatives and similar repositories for singleseqgset
Users that are interested in singleseqgset are comparing it to the libraries listed below
Sorting:
- Inference of cell-cell communication from single-cell RNAseq data☆48Updated 8 months ago
- Robust identification of perturbed cell types in single-cell RNA-seq data☆35Updated last month
- Code repository for single cell RNA-seq☆39Updated 5 years ago
- Infer Copy Number Alterations and Clonality in (Single-Cell) RNA-Seq Data☆45Updated last year
- An R shiny based tool used for single cell RNA-seq data visualization and analysis.☆34Updated 4 years ago
- Trajectory inference across multiple conditions with condiments: differential topology, progression, differentiation, and expression☆29Updated last year
- The codes and files for the study of subsolid nodules (SSN).☆15Updated 5 years ago
- scGSVA: Perform GSVA for single cell RNA seq☆67Updated last year
- Public code repository for the Banovich Lab at the Translational Genomics Research Institute (TGen).☆47Updated last year
- Aligning gene expression trajectories of single-cell reference and query systems☆80Updated 4 months ago
- A R package for advanced single cell data viz☆68Updated 3 months ago
- Functions for single cell data analysis☆32Updated 4 years ago
- Method for de novo mutation calling from droplet based single cell RNA seq data☆14Updated 4 years ago
- an integrative analysis tool for analysing large-scale single cell RNA-sequencing data☆36Updated 2 years ago
- A manually curated database of literature-supported ligand-receptor interactions in human and mouse☆30Updated last year
- SCDC☆45Updated 6 months ago
- ☆50Updated 5 years ago
- Repository for codes for the HBCA paper☆41Updated 2 years ago
- ☆37Updated 3 years ago
- A High Effect Marker Gene Search Tool for Single-cell RNA-seq Analysis☆33Updated last year
- ☆62Updated last year
- ☆16Updated 3 years ago
- Code used to run the data analysis in the hdWGCNA manuscript (Morabito et al 2022)☆17Updated 2 years ago
- R toolkit for inference and analysis of pathway-mediated cell-cell communication chain from single-cell transcriptomics☆36Updated 9 months ago
- Estimation of Single-Cell Potency with Single Cell Entropy☆43Updated 2 years ago
- R package for Protein activity analysis of single-cell RNAseq.☆85Updated 3 years ago
- cell type deconvolution for multi-condition bulk RNA-seq data☆30Updated 3 years ago
- ☆22Updated 2 years ago
- A pipeline for scRNA-seq data analysis☆15Updated 9 months ago
- ☆64Updated 6 years ago