🧬 Augmenting zero-shot mutant prediction by retrieval-based logits fusion. (ISMB/ECCB 2025)
☆133Apr 25, 2026Updated last month
Alternatives and similar repositories for VenusREM
Users that are interested in VenusREM are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- 🧬 Fusion of protein sequence and structural information, using denoising pre-training network for zero-shot protein engineering (eLife 2…☆91Apr 10, 2026Updated last month
- 🧬 Advanced hybrid language model for directed protein evolution. (NeurIPS 2024)☆153Apr 10, 2026Updated last month
- Official repository for the ProteinGym benchmarks☆430Mar 25, 2026Updated 2 months ago
- Versatile Embedding Network for Understanding protein Sequences☆25May 16, 2025Updated last year
- 🏭 AI agent platform with skills for protein engineering, the noob-friendly AI tutorial tool for life science professionals.☆231May 17, 2026Updated last week
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- ☆82Aug 26, 2025Updated 9 months ago
- This is the official code repository for the paper NeurIPS 2024 spotlight paper "Kermut: Composite kernel regression for protein variant …☆44Aug 5, 2025Updated 9 months ago
- ☆40Sep 17, 2024Updated last year
- GNN trained to predict changes in thermodynamic stability for protein point mutants☆252Mar 26, 2026Updated 2 months ago
- ☆43Jun 12, 2025Updated 11 months ago
- VenusFSFP: Few-Shot Protein Fitness Prediction☆115Nov 18, 2025Updated 6 months ago
- ☆81Jun 29, 2025Updated 11 months ago
- Saprot: Protein Language Model with Structural Alphabet (AA+3Di)☆601Mar 8, 2026Updated 2 months ago
- ☆40Mar 30, 2025Updated last year
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- ☆24Apr 10, 2026Updated last month
- Aligning protein generative models with experimental fitness☆121Mar 12, 2026Updated 2 months ago
- Generative diverse protein backbones by protein language model☆35Feb 27, 2026Updated 3 months ago
- Zero-shot prediction of mutation effects on protein function with multimodal deep representation learning☆71Aug 13, 2025Updated 9 months ago
- HyperMPNN ‒ A general strategy to design thermostable proteins learned from hyperthermophiles☆75Jul 2, 2025Updated 10 months ago
- ProteinDesign with RFdiffusion and ProteinMPNN/LigandMPNN☆23Mar 6, 2025Updated last year
- The Family of Diffusion Protein Language Models (DPLM)☆332Jul 25, 2025Updated 10 months ago
- Official code repository for the paper "ProteinNPT: Improving Protein Property Prediction and Design with Non-Parametric Transformers"☆130Nov 19, 2025Updated 6 months ago
- This is the offical codebase to reproduce and use EVOLVEpro, a model for in silico directed evolution of protein activities using few-sho…☆359Jun 11, 2025Updated 11 months ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Inference code for PoET: A generative model of protein families as sequences-of-sequences☆100Apr 24, 2024Updated 2 years ago
- Making Protein Language Modeling Accessible to All Biologists☆164May 21, 2026Updated last week
- ☆15May 16, 2025Updated last year
- ☆134Updated this week
- LatentDE: Latent-based Directed Evolution for Protein Sequence Design☆38Apr 2, 2025Updated last year
- Protein representation and design under a single training scheme☆24May 17, 2026Updated last week
- Deep learning framework for protein sequence design from a backbone scaffold that can leverage the molecular context including non-protei…☆49Nov 4, 2025Updated 6 months ago
- A comprehensive benchmark on the performances of multiple protein backbone generative models.☆69Feb 2, 2026Updated 3 months ago
- ☆31Oct 7, 2025Updated 7 months ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Generating and scoring novel enzyme sequences with a variety of models and metrics☆72Feb 21, 2026Updated 3 months ago
- HalluDesign, a hallucination-driven all-atom framework for the iterative co-optimization and co-design of protein sequences and structure…☆78May 21, 2026Updated last week
- ☆130May 19, 2026Updated last week
- PLMFit platform for TL on PLMs☆21Aug 13, 2025Updated 9 months ago
- Active Learning-Assisted Directed Evolution for Protein Engineering☆84Oct 24, 2025Updated 7 months ago
- Joint embedding of protein sequence and structure with discrete and continuous compressions of protein folding model latent spaces. http:…☆153Apr 16, 2025Updated last year
- ☆578Feb 6, 2025Updated last year