𧬠Augmenting zero-shot mutant prediction by retrieval-based logits fusion. (ISMB/ECCB 2025)
β141Apr 25, 2026Updated 3 months ago
Alternatives and similar repositories for VenusREM
Users that are interested in VenusREM are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- 𧬠Fusion of protein sequence and structural information, using denoising pre-training network for zero-shot protein engineering (eLife 2β¦β97Jul 20, 2026Updated 3 weeks ago
- 𧬠Advanced hybrid language model for directed protein evolution. (NeurIPS 2024)β159Jul 20, 2026Updated 3 weeks ago
- Official repository for the ProteinGym benchmarksβ460Mar 25, 2026Updated 4 months ago
- π AI agent platform with skills for protein engineering, the noob-friendly AI tutorial tool for life science professionals.β245Jul 28, 2026Updated 3 weeks ago
- β84Aug 26, 2025Updated 11 months ago
- GPU virtual machines on DigitalOcean Gradient AI β’ AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- GNN trained to predict changes in thermodynamic stability for protein point mutantsβ263Mar 26, 2026Updated 4 months ago
- β40Sep 17, 2024Updated last year
- Versatile Embedding Network for Understanding protein Sequencesβ26May 16, 2025Updated last year
- Extension of ThermoMPNN for double mutant predictionsβ65Mar 23, 2026Updated 4 months ago
- Protein stability prediction using rewired protein generative modelsβ90Jul 15, 2026Updated last month
- This is the official code repository for the paper NeurIPS 2024 spotlight paper "Kermut: Composite kernel regression for protein variant β¦β45Aug 5, 2025Updated last year
- Zero-shot prediction of mutation effects on protein function with multimodal deep representation learningβ72Aug 13, 2025Updated last year
- Saprot: Protein Language Model with Structural Alphabet (AA+3Di)β620Mar 8, 2026Updated 5 months ago
- Making Protein Language Modeling Accessible to All Biologistsβ169Aug 10, 2026Updated last week
- Deploy to Railway using AI coding agents - Free Credits Offer β’ AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- β180Jul 24, 2026Updated 3 weeks ago
- Code and model weights for PoET-2, a retrieval-augmented multimodel protein language model for protein sequence generation and representaβ¦β27Aug 20, 2025Updated 11 months ago
- VenusFSFP: Few-Shot Protein Fitness Predictionβ119Nov 18, 2025Updated 9 months ago
- Inference code for PoET: A generative model of protein families as sequences-of-sequencesβ105Apr 24, 2024Updated 2 years ago
- Sequence-Structure-Surface Model for Protein Fitness Prediction (S3F)β53Dec 3, 2024Updated last year
- β42Mar 30, 2025Updated last year
- β84Jun 29, 2025Updated last year
- Potts model-based protein sequence designβ110Jul 1, 2026Updated last month
- ProTrek: illuminating the Protein Universe through Trimodal Protein Language Model (Connecting text and protein)β213May 15, 2026Updated 3 months ago
- Managed hosting for WordPress and PHP on Cloudways β’ AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- 𧬠Large-scale protein functional residue or fragment prediction benchmark. (ICLR 2026)β25Apr 10, 2026Updated 4 months ago
- π Fusion of sequence, structure and feature information to improve protein solubility prediction (IEEE BIBM 2024).β36May 16, 2025Updated last year
- This is the offical codebase to reproduce and use EVOLVEpro, a model for in silico directed evolution of protein activities using few-shoβ¦β373Jun 11, 2025Updated last year
- Profluent-E1 family of Protein Encoder Modelsβ114Mar 11, 2026Updated 5 months ago
- β17May 16, 2025Updated last year
- Aligning protein generative models with experimental fitnessβ133Mar 12, 2026Updated 5 months ago
- Source code of Venus-MAXWELL: Efficient Learning of Protein-Mutation Stability Landscapes using Protein Language Modelsβ27Jun 3, 2025Updated last year
- Official code repository for the paper "ProteinNPT: Improving Protein Property Prediction and Design with Non-Parametric Transformers"β135Nov 19, 2025Updated 8 months ago
- HyperMPNN β A general strategy to design thermostable proteins learned from hyperthermophilesβ82Jul 2, 2025Updated last year
- Managed hosting for WordPress and PHP on Cloudways β’ AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Complete saturation mutagenesis of a protein using ESMβ19Feb 20, 2024Updated 2 years ago
- β43Jun 12, 2025Updated last year
- π Structure-aware adapter fine-tuning PLMs, with high training speed and impressive performance (Journal of Chemical Information and Modβ¦β27May 16, 2025Updated last year
- Public Release of ProGen3 family of Modelsβ114Jul 21, 2025Updated last year
- β622Feb 6, 2025Updated last year
- ProtNote is a multimodal deep learning model that leverages free-form text to enable both supervised and zero-shot protein function prediβ¦β64Apr 29, 2025Updated last year
- The Family of Diffusion Protein Language Models (DPLM)β342Jul 25, 2025Updated last year