🧬 Augmenting zero-shot mutant prediction by retrieval-based logits fusion. (ISMB/ECCB 2025)
☆133Apr 25, 2026Updated last month
Alternatives and similar repositories for VenusREM
Users that are interested in VenusREM are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- 🧬 Fusion of protein sequence and structural information, using denoising pre-training network for zero-shot protein engineering (eLife 2…☆93Apr 10, 2026Updated 2 months ago
- 🧬 Advanced hybrid language model for directed protein evolution. (NeurIPS 2024)☆153Apr 10, 2026Updated 2 months ago
- Official repository for the ProteinGym benchmarks☆435Mar 25, 2026Updated 2 months ago
- Versatile Embedding Network for Understanding protein Sequences☆26May 16, 2025Updated last year
- 🏭 AI agent platform with skills for protein engineering, the noob-friendly AI tutorial tool for life science professionals.☆236Updated this week
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- ☆82Aug 26, 2025Updated 9 months ago
- This is the official code repository for the paper NeurIPS 2024 spotlight paper "Kermut: Composite kernel regression for protein variant …☆44Aug 5, 2025Updated 10 months ago
- ☆40Sep 17, 2024Updated last year
- GNN trained to predict changes in thermodynamic stability for protein point mutants☆257Mar 26, 2026Updated 2 months ago
- ☆43Jun 12, 2025Updated last year
- VenusFSFP: Few-Shot Protein Fitness Prediction☆116Nov 18, 2025Updated 7 months ago
- ☆81Jun 29, 2025Updated 11 months ago
- Saprot: Protein Language Model with Structural Alphabet (AA+3Di)☆605Mar 8, 2026Updated 3 months ago
- ☆40Mar 30, 2025Updated last year
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- 🧬 Large-scale protein functional residue or fragment prediction benchmark. (ICLR 2026)☆24Apr 10, 2026Updated 2 months ago
- Aligning protein generative models with experimental fitness☆122Mar 12, 2026Updated 3 months ago
- Generative diverse protein backbones by protein language model☆35Feb 27, 2026Updated 3 months ago
- Zero-shot prediction of mutation effects on protein function with multimodal deep representation learning☆71Aug 13, 2025Updated 10 months ago
- HyperMPNN ‒ A general strategy to design thermostable proteins learned from hyperthermophiles☆74Jul 2, 2025Updated 11 months ago
- ProteinDesign with RFdiffusion and ProteinMPNN/LigandMPNN☆23Mar 6, 2025Updated last year
- The Family of Diffusion Protein Language Models (DPLM)☆336Jul 25, 2025Updated 10 months ago
- Official code repository for the paper "ProteinNPT: Improving Protein Property Prediction and Design with Non-Parametric Transformers"☆131Nov 19, 2025Updated 6 months ago
- This is the offical codebase to reproduce and use EVOLVEpro, a model for in silico directed evolution of protein activities using few-sho…☆361Jun 11, 2025Updated last year
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Inference code for PoET: A generative model of protein families as sequences-of-sequences☆102Apr 24, 2024Updated 2 years ago
- Making Protein Language Modeling Accessible to All Biologists☆165Jun 11, 2026Updated last week
- ☆16May 16, 2025Updated last year
- ☆135Jun 9, 2026Updated last week
- LatentDE: Latent-based Directed Evolution for Protein Sequence Design☆38Apr 2, 2025Updated last year
- Protein representation and design under a single training scheme☆24May 17, 2026Updated last month
- Deep learning framework for protein sequence design from a backbone scaffold that can leverage the molecular context including non-protei…☆49Nov 4, 2025Updated 7 months ago
- A comprehensive benchmark on the performances of multiple protein backbone generative models.☆69May 28, 2026Updated 3 weeks ago
- ☆31Oct 7, 2025Updated 8 months ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Generating and scoring novel enzyme sequences with a variety of models and metrics☆72Feb 21, 2026Updated 3 months ago
- HalluDesign, a hallucination-driven all-atom framework for the iterative co-optimization and co-design of protein sequences and structure…☆81Updated this week
- ☆133May 19, 2026Updated 3 weeks ago
- PLMFit platform for TL on PLMs☆21Aug 13, 2025Updated 10 months ago
- Joint embedding of protein sequence and structure with discrete and continuous compressions of protein folding model latent spaces. http:…☆153Apr 16, 2025Updated last year
- Active Learning-Assisted Directed Evolution for Protein Engineering☆83Oct 24, 2025Updated 7 months ago
- ☆586Feb 6, 2025Updated last year