🧬 Augmenting zero-shot mutant prediction by retrieval-based logits fusion. (ISMB/ECCB 2025)
☆137Apr 25, 2026Updated 3 months ago
Alternatives and similar repositories for VenusREM
Users that are interested in VenusREM are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- 🧬 Fusion of protein sequence and structural information, using denoising pre-training network for zero-shot protein engineering (eLife 2…☆97Jul 20, 2026Updated last week
- 🧬 Advanced hybrid language model for directed protein evolution. (NeurIPS 2024)☆158Jul 20, 2026Updated last week
- Official repository for the ProteinGym benchmarks☆455Mar 25, 2026Updated 4 months ago
- 🏭 AI agent platform with skills for protein engineering, the noob-friendly AI tutorial tool for life science professionals.☆246Updated this week
- ☆83Aug 26, 2025Updated 11 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- GNN trained to predict changes in thermodynamic stability for protein point mutants☆259Mar 26, 2026Updated 4 months ago
- ☆40Sep 17, 2024Updated last year
- Versatile Embedding Network for Understanding protein Sequences☆26May 16, 2025Updated last year
- Extension of ThermoMPNN for double mutant predictions☆63Mar 23, 2026Updated 4 months ago
- Protein stability prediction using rewired protein generative models☆87Jul 15, 2026Updated last week
- This is the official code repository for the paper NeurIPS 2024 spotlight paper "Kermut: Composite kernel regression for protein variant …☆45Aug 5, 2025Updated 11 months ago
- Zero-shot prediction of mutation effects on protein function with multimodal deep representation learning☆72Aug 13, 2025Updated 11 months ago
- Saprot: Protein Language Model with Structural Alphabet (AA+3Di)☆613Mar 8, 2026Updated 4 months ago
- Making Protein Language Modeling Accessible to All Biologists☆168Updated this week
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- ☆167Updated this week
- Code and model weights for PoET-2, a retrieval-augmented multimodel protein language model for protein sequence generation and representa…☆27Aug 20, 2025Updated 11 months ago
- VenusFSFP: Few-Shot Protein Fitness Prediction☆119Nov 18, 2025Updated 8 months ago
- Inference code for PoET: A generative model of protein families as sequences-of-sequences☆105Apr 24, 2024Updated 2 years ago
- Sequence-Structure-Surface Model for Protein Fitness Prediction (S3F)☆53Dec 3, 2024Updated last year
- ☆40Mar 30, 2025Updated last year
- ☆83Jun 29, 2025Updated last year
- Potts model-based protein sequence design☆107Jul 1, 2026Updated 3 weeks ago
- ProTrek: illuminating the Protein Universe through Trimodal Protein Language Model (Connecting text and protein)☆211May 15, 2026Updated 2 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- 🧬 Large-scale protein functional residue or fragment prediction benchmark. (ICLR 2026)☆24Apr 10, 2026Updated 3 months ago
- 📈 Fusion of sequence, structure and feature information to improve protein solubility prediction (IEEE BIBM 2024).☆36May 16, 2025Updated last year
- This is the offical codebase to reproduce and use EVOLVEpro, a model for in silico directed evolution of protein activities using few-sho…☆370Jun 11, 2025Updated last year
- Profluent-E1 family of Protein Encoder Models☆114Mar 11, 2026Updated 4 months ago
- ☆17May 16, 2025Updated last year
- Aligning protein generative models with experimental fitness☆124Mar 12, 2026Updated 4 months ago
- Source code of Venus-MAXWELL: Efficient Learning of Protein-Mutation Stability Landscapes using Protein Language Models☆25Jun 3, 2025Updated last year
- Official code repository for the paper "ProteinNPT: Improving Protein Property Prediction and Design with Non-Parametric Transformers"☆134Nov 19, 2025Updated 8 months ago
- HyperMPNN ‒ A general strategy to design thermostable proteins learned from hyperthermophiles☆78Jul 2, 2025Updated last year
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Complete saturation mutagenesis of a protein using ESM☆19Feb 20, 2024Updated 2 years ago
- ☆43Jun 12, 2025Updated last year
- 🎈 Structure-aware adapter fine-tuning PLMs, with high training speed and impressive performance (Journal of Chemical Information and Mod…☆27May 16, 2025Updated last year
- Public Release of ProGen3 family of Models☆114Jul 21, 2025Updated last year
- ☆608Feb 6, 2025Updated last year
- ProtNote is a multimodal deep learning model that leverages free-form text to enable both supervised and zero-shot protein function predi…☆63Apr 29, 2025Updated last year
- The Family of Diffusion Protein Language Models (DPLM)☆341Jul 25, 2025Updated last year