☆134May 19, 2026Updated 3 months ago
Alternatives and similar repositories for AMPLIFY
Users that are interested in AMPLIFY are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆26May 19, 2024Updated 2 years ago
- ☆40Sep 17, 2024Updated last year
- Adapting protein language models for structure-conditioned design☆42Aug 5, 2024Updated 2 years ago
- ☆212Apr 21, 2025Updated last year
- AlphaBind code + model accompanying pre-print☆94Jul 24, 2025Updated last year
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Structure-conditioned masked language modeling for protein sequence design☆74Jan 31, 2024Updated 2 years ago
- The pytorch code of TDFold☆21Feb 25, 2026Updated 6 months ago
- Profluent-E1 family of Protein Encoder Models☆115Mar 11, 2026Updated 5 months ago
- PINDER: The Protein INteraction Dataset and Evaluation Resource☆158Nov 15, 2024Updated last year
- Joint embedding of protein sequence and structure with discrete and continuous compressions of protein folding model latent spaces. http:…☆155Apr 16, 2025Updated last year
- Joint sequence and structure generation with RoseTTAFold sequence space diffusion☆332Oct 28, 2024Updated last year
- Official code repository for the paper "ProteinNPT: Improving Protein Property Prediction and Design with Non-Parametric Transformers"☆135Nov 19, 2025Updated 9 months ago
- Official repository for the ProteinGym benchmarks☆467Mar 25, 2026Updated 5 months ago
- Directed evolution of proteins in sequence space with gradients☆97Oct 18, 2025Updated 10 months ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Efficient implementatin of ESM family.☆86Sep 9, 2025Updated 11 months ago
- 🧬 Augmenting zero-shot mutant prediction by retrieval-based logits fusion. (ISMB/ECCB 2025)☆143Apr 25, 2026Updated 4 months ago
- Aligning protein generative models with experimental fitness☆145Mar 12, 2026Updated 5 months ago
- Template-based protein design with Raygun☆148Jul 30, 2026Updated last month
- Official repository for the paper "Tranception: Protein Fitness Prediction with Autoregressive Transformers and Inference-time Retrieval"☆170Aug 24, 2023Updated 3 years ago
- ProteusAI is a library for the machine learning driven engineering of proteins. The library enables workflows from protein structure pred…☆87Sep 11, 2025Updated 11 months ago
- Structure-Informed Protein Language Model☆40Feb 15, 2024Updated 2 years ago
- Generating and scoring novel enzyme sequences with a variety of models and metrics☆72Feb 21, 2026Updated 6 months ago
- Diffusion-based all-atom protein generative model.☆238Aug 27, 2025Updated last year
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Official code release for Ambient Protein Diffusion☆35Aug 30, 2025Updated last year
- Benchmarking framework for protein representation learning. Includes a large number of pre-training and downstream task datasets, models …☆279Apr 27, 2025Updated last year
- Tokenizing Loops of Antibodies☆37Nov 23, 2025Updated 9 months ago
- ☆101Jul 24, 2026Updated last month
- ☆139Jul 12, 2024Updated 2 years ago
- Protein language model trained on coding DNA☆55Oct 20, 2024Updated last year
- Saprot: Protein Language Model with Structural Alphabet (AA+3Di)☆626Mar 8, 2026Updated 5 months ago
- Making Protein Language Modeling Accessible to All Biologists☆169Updated this week
- ☆15Jul 14, 2025Updated last year
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Public RFDiffusionAA repo☆484Jul 9, 2024Updated 2 years ago
- Potts model-based protein sequence design☆111Jul 1, 2026Updated last month
- HyperMPNN ‒ A general strategy to design thermostable proteins learned from hyperthermophiles☆83Jul 2, 2025Updated last year
- [ICML 25] We train and evaluate SAEs to identify interpretable features in pLMs and show their potential for scientific discovery.☆128Apr 23, 2026Updated 4 months ago
- Learning the language of protein-protein interactions☆155Jun 15, 2026Updated 2 months ago
- A protein structure dataset that combines 3D atomic coordinates with biophysical and evolutionary properties for every atom in every "cle…☆39Jul 25, 2024Updated 2 years ago
- ☆93Feb 11, 2026Updated 6 months ago