yoakiyama / MSA_PairformerLinks
☆95Updated last week
Alternatives and similar repositories for MSA_Pairformer
Users that are interested in MSA_Pairformer are comparing it to the libraries listed below
Sorting:
- Efficient implementatin of ESM family.☆72Updated last week
- Learning the language of protein-protein interactions☆92Updated 3 weeks ago
- Aligning protein generative models with experimental fitness☆105Updated last month
- Fast deep learning methods for large-scale protein-protein interaction screening☆52Updated last month
- Generating and scoring novel enzyme sequences with a variety of models and metrics☆70Updated 3 months ago
- Inference code for PoET: A generative model of protein families as sequences-of-sequences☆79Updated last year
- ☆45Updated 8 months ago
- Fast and accurate protein domain segmentation using Invariant Point Attention☆41Updated 3 months ago
- Fast indexing and search of discontinuous motifs in protein structures☆81Updated last week
- ☆61Updated last year
- Active Learning-Assisted Directed Evolution for Protein Engineering☆65Updated 10 months ago
- Structure-based self-supervised learning enables ultrafast prediction of stability changes upon mutations☆66Updated 2 months ago
- ☆87Updated last month
- This is the official code repository for the paper NeurIPS 2024 spotlight paper "Kermut: Composite kernel regression for protein variant …☆34Updated last month
- Code for humanization of antibody and nanobody☆52Updated 3 weeks ago
- Official code repository for the paper "ProteinNPT: Improving Protein Property Prediction and Design with Non-Parametric Transformers"☆117Updated 6 months ago
- Local Interaction Score (LIS) Calculation from AlphaFold-Multimer (Enhanced Protein-Protein Interaction Discovery via AlphaFold-Multimer)☆58Updated 6 months ago
- Scripts to run AlphaFold3, Boltz-1 and Chai-1 with MMseqs2 MSAs and custom templates.☆88Updated last month
- ☆71Updated 6 months ago
- ☆27Updated last month
- ProteusAI is a library for the machine learning driven engineering of proteins. The library enables workflows from protein structure pred…☆63Updated last week
- TemStaPro - a program for protein thermostability prediction using sequence representations from a protein language model.☆63Updated last year
- Extension of ThermoMPNN for double mutant predictions☆43Updated last month
- Neural networks to fit interpretable models and quantify energies, energetic couplings, epistasis, and allostery from deep mutational sca…☆53Updated 5 months ago
- Metrics for our protein design competitions.☆35Updated 10 months ago
- ☆28Updated 7 months ago
- Mutational Effect Transfer Learning (METL) framework for pretraining and finetuning biophysics-informed protein language models☆42Updated 2 weeks ago
- Improved protein complex prediction with AlphaFold-multimer by denoising the MSA profile☆69Updated last year
- Scripts to benchmark and train foldseek☆39Updated last year
- Results and data from the pilot round of the Protein Engineering Tournament☆30Updated 5 months ago