☆130Feb 27, 2026Updated last week
Alternatives and similar repositories for MSA_Pairformer
Users that are interested in MSA_Pairformer are comparing it to the libraries listed below
Sorting:
- MiniFold: Simple, Fast and Accurate Protein Structure Prediction☆84Jul 10, 2025Updated 7 months ago
- ☆32Feb 5, 2025Updated last year
- List of papers on protein binding site prediction☆11Aug 11, 2023Updated 2 years ago
- Metal and Water prediction☆13Feb 5, 2025Updated last year
- Sidechain conditioning and modeling for full-atom protein sequence design☆137Nov 11, 2025Updated 3 months ago
- Protein representation and design under a single training scheme☆24Updated this week
- ☆241Feb 12, 2026Updated 3 weeks ago
- ☆31Dec 12, 2024Updated last year
- FAPLM: A Drop-in Efficient Pytorch Implementation of Protein Language Models☆166Jul 30, 2025Updated 7 months ago
- ☆35Jun 17, 2025Updated 8 months ago
- PackDock: a Diffusion Based Side Chain Packing Model for Flexible Protein-Ligand Docking☆56Oct 17, 2025Updated 4 months ago
- ☆37Mar 30, 2025Updated 11 months ago
- Efficient implementatin of ESM family.☆80Sep 9, 2025Updated 6 months ago
- ☆135Jun 3, 2025Updated 9 months ago
- ☆19May 14, 2025Updated 9 months ago
- A partially latent flow matching model for the joint generation of a protein’s amino acid sequence and full atomistic structure, includin…☆275Sep 23, 2025Updated 5 months ago
- PLACER is graph neural network for local prediction of protein-ligand conformational ensembles.☆229Nov 5, 2025Updated 4 months ago
- ☆31Nov 23, 2025Updated 3 months ago
- ☆106Feb 12, 2026Updated 3 weeks ago
- ☆40Jun 12, 2025Updated 8 months ago
- 🧬 Augmenting zero-shot mutant prediction by retrieval-based logits fusion. (ISMB/ECCB 2025)☆123Feb 7, 2026Updated last month
- ☆551Feb 6, 2025Updated last year
- ☆19Nov 21, 2025Updated 3 months ago
- Official repository of ReactZyme☆40Oct 12, 2024Updated last year
- A Unified Evaluation Suite for Protein Design☆127Jan 27, 2026Updated last month
- ☆210Apr 21, 2025Updated 10 months ago
- Official repository for the ProteinGym benchmarks☆394Jan 12, 2026Updated last month
- Official repo for paper "AlphaFold-Multimer accurately captures interactions and dynamics of intrinsically disordered protein regions"☆17Dec 8, 2024Updated last year
- ☆118Dec 7, 2022Updated 3 years ago
- Fast protein backbone generation with SE(3) flow matching.☆315Jul 19, 2024Updated last year
- Generative diverse protein backbones by protein language model☆34Feb 27, 2026Updated last week
- ☆40Jul 28, 2025Updated 7 months ago
- Generating and scoring novel enzyme sequences with a variety of models and metrics☆72Feb 21, 2026Updated 2 weeks ago
- Implementation of DiffPack: A Torsional Diffusion Model for Autoregressive Protein Side-Chain Packing☆89Dec 4, 2023Updated 2 years ago
- Joint embedding of protein sequence and structure with discrete and continuous compressions of protein folding model latent spaces. http:…☆150Apr 16, 2025Updated 10 months ago
- ☆217Mar 2, 2024Updated 2 years ago
- Versatile computational pipeline for processing protein structure data for deep learning applications.☆274Feb 14, 2024Updated 2 years ago
- ☆51Aug 19, 2024Updated last year
- Calculate the RMSD between two antibody structure (including nanobody and antibody).☆11May 19, 2023Updated 2 years ago