☆190Jul 24, 2026Updated 2 months ago
Alternatives and similar repositories for MSA_Pairformer
Users that are interested in MSA_Pairformer are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Profluent-E1 family of Protein Encoder Models☆115Mar 11, 2026Updated 7 months ago
- ☆258Sep 22, 2026Updated 3 weeks ago
- A generalized computational framework for biomolecular modeling.☆452Oct 8, 2026Updated last week
- ☆42Mar 30, 2025Updated last year
- Fast indexing and search of discontinuous motifs in protein structures☆218Sep 18, 2026Updated last month
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- ☆158May 18, 2026Updated 4 months ago
- Proteina is a new large-scale flow-based protein backbone generator that utilizes hierarchical fold class labels for conditioning and rel…☆280Jul 24, 2025Updated last year
- Genie 3 is a fast, all-atom SE(3)-equivariant diffusion model for protein design. It achieves state-of-the-art performance on uncondition…☆138Updated this week
- MiniFold: Simple, Fast and Accurate Protein Structure Prediction☆96Jul 10, 2025Updated last year
- A Unified Evaluation Suite for Protein Design☆141Jan 27, 2026Updated 8 months ago
- ☆34Feb 5, 2025Updated last year
- ☆36Mar 2, 2026Updated 7 months ago
- SwitchCraft: A Programmatic Framework for Designing State-Switching Proteins☆94Jun 1, 2026Updated 4 months ago
- IntelliFold: A Controllable Foundation Model for General and Specialized Biomolecular Structure Prediction.☆231Oct 10, 2026Updated last week
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- This is the official code repository for the paper NeurIPS 2024 spotlight paper "Kermut: Composite kernel regression for protein variant …☆47Aug 5, 2025Updated last year
- A partially latent flow matching model for the joint generation of a protein’s amino acid sequence and full atomistic structure, includin…☆313Sep 23, 2025Updated last year
- Official repository of PXDesign☆268Dec 31, 2025Updated 9 months ago
- Potts model-based protein sequence design☆118Jul 1, 2026Updated 3 months ago
- PLACER is graph neural network for local prediction of protein-ligand conformational ensembles.☆269Nov 5, 2025Updated 11 months ago
- ☆21Nov 21, 2025Updated 10 months ago
- Scoring function for interprotein interactions in AlphaFold2 and AlphaFold3☆277Jan 3, 2026Updated 9 months ago
- A Score-Only Adaptation of AlphaFold3 for Biomolecular Structure Evaluation☆143Jan 28, 2026Updated 8 months ago
- All-atom protein generation using latent diffusion, with compositional function and taxonomic prompts. http://bit.ly/plaid-proteins☆126May 27, 2025Updated last year
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Sidechain conditioning and modeling for full-atom protein sequence design☆151Nov 11, 2025Updated 11 months ago
- FAPLM: A Drop-in Efficient Pytorch Implementation of Protein Language Models☆167Mar 28, 2026Updated 6 months ago
- A fully open source biomolecular structure prediction model based on AlphaFold3☆897Updated this week
- Aligning protein generative models with experimental fitness☆153Mar 12, 2026Updated 7 months ago
- Updated Protpardelle models with more robust motif scaffolding and multichain support☆88Oct 2, 2026Updated 2 weeks ago
- Diffusion-based all-atom protein generative model.☆239Aug 27, 2025Updated last year
- ☆84Jun 10, 2026Updated 4 months ago
- Multiple Protein Structure Alignment at Scale with FoldMason☆283May 11, 2026Updated 5 months ago
- Official code release for Ambient Protein Diffusion☆35Aug 30, 2025Updated last year
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- Code for the DISCO model: General Multimodal Protein Design Enables DNA-Encoding of Chemistry☆221May 13, 2026Updated 5 months ago
- Implementation for SE(3) diffusion model with application to protein backbone generation☆425Jul 3, 2023Updated 3 years ago
- Generative model for protein binder design for protein and small molecule targets. Combines a pretrained flow-based generative model (bui…☆455Updated this week
- The Family of Diffusion Protein Language Models (DPLM)☆349Jul 25, 2025Updated last year
- Efficient implementatin of ESM family.☆88Sep 9, 2025Updated last year
- ☆235Mar 2, 2024Updated 2 years ago
- 🧬 Augmenting zero-shot mutant prediction by retrieval-based logits fusion. (ISMB/ECCB 2025)☆147Sep 29, 2026Updated 2 weeks ago