westlake-repl / ProTrekLinks
ProTrek: Navigating the Protein Universe through Tri-Modal Contrastive Learning
☆131Updated 3 weeks ago
Alternatives and similar repositories for ProTrek
Users that are interested in ProTrek are comparing it to the libraries listed below
Sorting:
- Making Protein Modeling Accessible to All Biologists☆119Updated last week
- Text-guided protein design☆85Updated 3 weeks ago
- 🧬 Advanced hybrid language model for directed protein evolution. (NeurIPS 2024)☆139Updated 4 months ago
- GNN trained to predict changes in thermodynamic stability for protein point mutants☆196Updated 2 months ago
- Official Implementation of IgGM☆135Updated 2 weeks ago
- Code for ColabDock paper☆148Updated 5 months ago
- ☆114Updated last year
- ☆116Updated 3 months ago
- open source code for Tencent tFold☆113Updated 6 months ago
- Python code for fine-tuning AlphaFold to perform protein-peptide binding predictions☆163Updated last year
- VenusFSFP: Few-Shot Protein Fitness Prediction☆94Updated last month
- PLM based active learning model for protein engineering☆83Updated last year
- ☆198Updated 5 months ago
- Zero-shot prediction of mutation effects on protein function with multimodal deep representation learning☆66Updated last month
- Universal Structure Alignment of Monomeric and Complex Structure of Nucleic Acids and Proteins☆159Updated 5 months ago
- Official code repository for the paper "ProteinNPT: Improving Protein Property Prediction and Design with Non-Parametric Transformers"☆119Updated 6 months ago
- ☆81Updated last year
- ☆74Updated last year
- ☆140Updated 2 months ago
- 🏭 Easy data acquisition, benchmark resources, PLM fine-tuning for bio-researchers. (ACL Demo 2025)☆152Updated this week
- Target Sequence-Conditioned Generation of Peptide Binders via Masked Language Modeling☆103Updated 2 weeks ago
- In silico directed evolution of peptide binders with AlphaFold☆237Updated last month
- Geometric deep learning method to predict protein binding interfaces from a protein structure.☆145Updated last year
- List of computational protein design research labs☆197Updated 7 months ago
- Data repository for "Fine-tuning protein language models boosts predictions across diverse tasks"☆47Updated last year
- This is the offical codebase to reproduce and use EVOLVEpro, a model for in silico directed evolution of protein activities using few-sho…☆294Updated 3 months ago
- Predict multiple protein conformations using sequence clustering and AlphaFold2.☆162Updated 2 months ago
- FAPLM: A Drop-in Efficient Pytorch Implementation of Protein Language Models☆151Updated 2 months ago
- Protein folding in Pymol☆110Updated last week
- A generalized enzyme kinetics parameter prediction model.☆61Updated this week