ProTrek: illuminating the Protein Universe through Trimodal Protein Language Model
☆204Feb 14, 2026Updated 2 months ago
Alternatives and similar repositories for ProTrek
Users that are interested in ProTrek are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Making Protein Language Modeling Accessible to All Biologists☆161Updated this week
- Saprot: Protein Language Model with Structural Alphabet (AA+3Di)☆593Mar 8, 2026Updated last month
- Evolla: A frontier protein-language generative model designed to decode the molecular language of proteins.☆67Apr 13, 2026Updated 2 weeks ago
- Protein representation and design under a single training scheme☆24Updated this week
- ☆26Oct 8, 2024Updated last year
- Open source password manager - Proton Pass • AdSecurely store, share, and autofill your credentials with Proton Pass, the end-to-end encrypted password manager trusted by millions.
- ☆137Jun 3, 2025Updated 10 months ago
- ☆27Feb 10, 2024Updated 2 years ago
- Zero-shot prediction of mutation effects on protein function with multimodal deep representation learning☆71Aug 13, 2025Updated 8 months ago
- ☆118Jan 3, 2026Updated 3 months ago
- Bilingual Language Model for Protein Sequence and Structure☆309Mar 6, 2026Updated last month
- The Family of Diffusion Protein Language Models (DPLM)☆322Jul 25, 2025Updated 9 months ago
- ML-optimized library design with improved fitness and diversity for protein engineering☆37Nov 5, 2025Updated 5 months ago
- 🧬 Fusion of protein sequence and structural information, using denoising pre-training network for zero-shot protein engineering (eLife 2…☆91Apr 10, 2026Updated 3 weeks ago
- Active Learning-Assisted Directed Evolution for Protein Engineering☆83Oct 24, 2025Updated 6 months ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Protein language models-assisted optimization of a uracil-N-glycosylase variant enables programmable T-to-G and T-to-C base editing☆18Jun 6, 2024Updated last year
- GNN trained to predict changes in thermodynamic stability for protein point mutants☆247Mar 26, 2026Updated last month
- HyperMPNN ‒ A general strategy to design thermostable proteins learned from hyperthermophiles☆74Jul 2, 2025Updated 10 months ago
- 🧬 Augmenting zero-shot mutant prediction by retrieval-based logits fusion. (ISMB/ECCB 2025)☆131Apr 25, 2026Updated last week
- This is the offical codebase to reproduce and use EVOLVEpro, a model for in silico directed evolution of protein activities using few-sho…☆354Jun 11, 2025Updated 10 months ago
- Official implementation of Generative Diffusion Models for Antibody Design, Docking, and Optimization.☆61Oct 25, 2023Updated 2 years ago
- Fold Conditioned protein design pipeline based on AF2Multimer Hallucination☆51Mar 25, 2026Updated last month
- ☆97Apr 16, 2026Updated 2 weeks ago
- Diffusion-based all-atom protein generative model.☆235Aug 27, 2025Updated 8 months ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Text-guided protein design☆93Mar 30, 2026Updated last month
- FAPLM: A Drop-in Efficient Pytorch Implementation of Protein Language Models☆167Mar 28, 2026Updated last month
- Official Implementation of IgGM☆187Nov 30, 2025Updated 5 months ago
- Toward High-Accuracy Open-Source Biomolecular Structure Prediction.☆1,853Apr 23, 2026Updated last week
- Design data and process for the AdaptyvBio protein design competition☆11Dec 11, 2024Updated last year
- User friendly and accurate binder design pipeline☆1,080Apr 17, 2026Updated 2 weeks ago
- Foldseek enables fast and sensitive comparisons of large structure sets.☆1,226Mar 10, 2026Updated last month
- ☆33Aug 12, 2024Updated last year
- 🏭 AI agent platform with skills for protein engineering, the noob-friendly AI tutorial tool for life science professionals.☆228Apr 20, 2026Updated last week
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- ☆31Dec 12, 2024Updated last year
- PLMSearch enables accurate and fast homologous protein search with only sequences as input☆79Sep 9, 2025Updated 7 months ago
- Public Release of ProGen3 family of Models☆107Jul 21, 2025Updated 9 months ago
- Protein Design by Machine Learning guided Directed Evolution☆48Jan 1, 2026Updated 4 months ago
- Code for the ProteinMPNN paper☆1,713Aug 14, 2024Updated last year
- Protein structure diffusion model for unconditional protein generation and motif scaffolding☆191Jun 24, 2024Updated last year
- ☆2,318Mar 19, 2026Updated last month