VenusFSFP: Few-Shot Protein Fitness Prediction
☆115Nov 18, 2025Updated 6 months ago
Alternatives and similar repositories for VenusFSFP
Users that are interested in VenusFSFP are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆33Aug 12, 2024Updated last year
- ML-optimized library design with improved fitness and diversity for protein engineering☆37Nov 5, 2025Updated 6 months ago
- 🧬 Advanced hybrid language model for directed protein evolution. (NeurIPS 2024)☆153Apr 10, 2026Updated last month
- ☆82Aug 26, 2025Updated 8 months ago
- This is the official code repository for the paper NeurIPS 2024 spotlight paper "Kermut: Composite kernel regression for protein variant …☆44Aug 5, 2025Updated 9 months ago
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- ☆33Feb 5, 2025Updated last year
- Deep learning framework for protein sequence design from a backbone scaffold that can leverage the molecular context including non-protei…☆48Nov 4, 2025Updated 6 months ago
- GNN trained to predict changes in thermodynamic stability for protein point mutants☆252Mar 26, 2026Updated last month
- Active Learning-Assisted Directed Evolution for Protein Engineering☆84Oct 24, 2025Updated 7 months ago
- 🧬 Augmenting zero-shot mutant prediction by retrieval-based logits fusion. (ISMB/ECCB 2025)☆133Apr 25, 2026Updated last month
- HyperMPNN ‒ A general strategy to design thermostable proteins learned from hyperthermophiles☆75Jul 2, 2025Updated 10 months ago
- Official repository for the ProteinGym benchmarks☆430Mar 25, 2026Updated 2 months ago
- Aligning protein generative models with experimental fitness☆121Mar 12, 2026Updated 2 months ago
- This is the offical codebase to reproduce and use EVOLVEpro, a model for in silico directed evolution of protein activities using few-sho…☆359Jun 11, 2025Updated 11 months ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Source code of Venus-MAXWELL: Efficient Learning of Protein-Mutation Stability Landscapes using Protein Language Models☆25Jun 3, 2025Updated 11 months ago
- Protein representation and design under a single training scheme☆24May 17, 2026Updated last week
- 🏭 AI agent platform with skills for protein engineering, the noob-friendly AI tutorial tool for life science professionals.☆231May 17, 2026Updated last week
- ☆119Jan 3, 2026Updated 4 months ago
- ☆18Dec 23, 2024Updated last year
- Gibbs sampling for generating protein sequences☆58Jan 17, 2025Updated last year
- Saprot: Protein Language Model with Structural Alphabet (AA+3Di)☆601Mar 8, 2026Updated 2 months ago
- 🎈 Structure-aware adapter fine-tuning PLMs, with high training speed and impressive performance (Journal of Chemical Information and Mod…☆27May 16, 2025Updated last year
- Extension of ThermoMPNN for double mutant predictions☆62Mar 23, 2026Updated 2 months ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Sidechain conditioning and modeling for full-atom protein sequence design☆138Nov 11, 2025Updated 6 months ago
- ☆23Jun 10, 2025Updated 11 months ago
- Generating and scoring novel enzyme sequences with a variety of models and metrics☆72Feb 21, 2026Updated 3 months ago
- Official repository for the paper "Tranception: Protein Fitness Prediction with Autoregressive Transformers and Inference-time Retrieval"☆167Aug 24, 2023Updated 2 years ago
- ☆41Jul 28, 2025Updated 9 months ago
- Making Protein Language Modeling Accessible to All Biologists☆164May 15, 2026Updated last week
- LatentDE: Latent-based Directed Evolution for Protein Sequence Design☆38Apr 2, 2025Updated last year
- Structure-based self-supervised learning enables ultrafast prediction of stability changes upon mutations☆107Apr 15, 2026Updated last month
- Efficient implementatin of ESM family.☆85Sep 9, 2025Updated 8 months ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- 🧬 Fusion of protein sequence and structural information, using denoising pre-training network for zero-shot protein engineering (eLife 2…☆91Apr 10, 2026Updated last month
- The Family of Diffusion Protein Language Models (DPLM)☆332Jul 25, 2025Updated 10 months ago
- Finding patch of conserved amino acid sites in 3D structure☆14Apr 13, 2025Updated last year
- ☆23Dec 11, 2024Updated last year
- ☆31Oct 7, 2025Updated 7 months ago
- ☆149Jul 16, 2025Updated 10 months ago
- Structure-conditioned masked language modeling for protein sequence design☆74Jan 31, 2024Updated 2 years ago