β77Aug 26, 2025Updated 6 months ago
Alternatives and similar repositories for Pro-Prime
Users that are interested in Pro-Prime are comparing it to the libraries listed below
Sorting:
- π Easy data acquisition, benchmark resources, PLM fine-tuning for bio-researchers. (ACL Demo 2025)β172Updated this week
- β33Aug 12, 2024Updated last year
- VenusFSFP: Few-Shot Protein Fitness Predictionβ107Nov 18, 2025Updated 3 months ago
- This is the offical codebase to reproduce and use EVOLVEpro, a model for in silico directed evolution of protein activities using few-shoβ¦β333Jun 11, 2025Updated 8 months ago
- Source code of Venus-MAXWELL: Efficient Learning of Protein-Mutation Stability Landscapes using Protein Language Modelsβ23Jun 3, 2025Updated 9 months ago
- 𧬠Augmenting zero-shot mutant prediction by retrieval-based logits fusion. (ISMB/ECCB 2025)β122Feb 7, 2026Updated 3 weeks ago
- Structure-based self-supervised learning enables ultrafast prediction of stability changes upon mutationsβ96Dec 10, 2025Updated 2 months ago
- Extension of ThermoMPNN for double mutant predictionsβ54Oct 8, 2025Updated 4 months ago
- Active Learning-Assisted Directed Evolution for Protein Engineeringβ80Oct 24, 2025Updated 4 months ago
- The official code repository of "OmniESI: A unified framework for enzyme-substrate interaction prediction with progressive conditional deβ¦β28Aug 26, 2025Updated 6 months ago
- β25Oct 8, 2024Updated last year
- β74Feb 13, 2026Updated 2 weeks ago
- Protein representation and design under a single training schemeβ24Updated this week
- ProtFlow Implementation of the RiffDiff pipeline to design enzymes from theozymes.β84Dec 3, 2025Updated 3 months ago
- Repo of AntiBMPNN project for antibody sequence design.β29May 28, 2025Updated 9 months ago
- β70Feb 25, 2026Updated last week
- β144Aug 17, 2022Updated 3 years ago
- β23Jul 14, 2023Updated 2 years ago
- A generalized enzyme kinetics parameter prediction model.β74Oct 2, 2025Updated 5 months ago
- Official repository of GENzymeβ62Nov 29, 2024Updated last year
- β19May 14, 2025Updated 9 months ago
- Making Protein Language Modeling Accessible to All Biologistsβ156Updated this week
- GNN trained to predict changes in thermodynamic stability for protein point mutantsβ226Aug 7, 2025Updated 6 months ago
- 𧬠Fusion of protein sequence and structural information, using denoising pre-training network for zero-shot protein engineering (eLife 2β¦β82May 16, 2025Updated 9 months ago
- β40Oct 22, 2024Updated last year
- β22Dec 11, 2024Updated last year
- β40Sep 17, 2024Updated last year
- EnzyHTP is a python library that automates the complete life-cycle of enzyme modelingβ31Feb 12, 2026Updated 2 weeks ago
- 𧬠Advanced hybrid language model for directed protein evolution. (NeurIPS 2024)β147May 29, 2025Updated 9 months ago
- The gmx_rrcs script is designed to calculate the residues-residues contact scores (rrcs) from a trajectory file generated by GROMACS.β18Jun 16, 2025Updated 8 months ago
- PPI version of Pythiaβ27Sep 12, 2025Updated 5 months ago
- The official GitHub repository for the Nature Communications paper "Computational Design of Generalist Cyclopropanases with Stereodivergeβ¦β13Jan 23, 2026Updated last month
- β20Oct 4, 2022Updated 3 years ago
- β65Apr 8, 2025Updated 10 months ago
- β450Feb 9, 2026Updated 3 weeks ago
- β82Jun 29, 2025Updated 8 months ago
- β15Apr 3, 2025Updated 11 months ago
- AlphaFast: ultra-high-throughput AlphaFold3 inference with MMSeqs2-GPUβ84Updated this week
- β68Oct 23, 2025Updated 4 months ago