Source code of Venus-MAXWELL: Efficient Learning of Protein-Mutation Stability Landscapes using Protein Language Models
☆29Jun 3, 2025Updated last year
Alternatives and similar repositories for Venus-MAXWELL
Users that are interested in Venus-MAXWELL are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆42Jun 17, 2025Updated last year
- Protein representation and design under a single training scheme☆25May 17, 2026Updated 4 months ago
- For the purpose of post progressing of MD carried by gromacs☆24Jul 2, 2025Updated last year
- ☆20May 14, 2025Updated last year
- 🎈 Structure-aware adapter fine-tuning PLMs, with high training speed and impressive performance (Journal of Chemical Information and Mod…☆27May 16, 2025Updated last year
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- ☆86Aug 26, 2025Updated last year
- Official implementation of NeurIPS'24 paper "Bridge-IF: Learning Inverse Protein Folding with Markov Bridges"☆18Mar 16, 2025Updated last year
- Official repository for the Protriever paper☆17Jun 5, 2025Updated last year
- Code and model weights for PoET-2, a retrieval-augmented multimodel protein language model for protein sequence generation and representa…☆30Aug 20, 2025Updated last year
- ☆42Aug 20, 2026Updated last month
- Extension of ThermoMPNN for double mutant predictions☆66Mar 23, 2026Updated 6 months ago
- ☆38Oct 23, 2025Updated 11 months ago
- A comprehensive benchmark on the performances of multiple protein backbone generative models.☆74Aug 4, 2026Updated last month
- A geometric foundation model for enzyme retrieval with evolutionary insights.☆103Jul 29, 2026Updated last month
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- [NeurIPS 25 Spotlight] Protein Design with Dynamic Protein Vocabulary☆22Nov 23, 2025Updated 10 months ago
- 🧬 Augmenting zero-shot mutant prediction by retrieval-based logits fusion. (ISMB/ECCB 2025)☆147Apr 25, 2026Updated 5 months ago
- Code release for "Improving diffusion-based protein backbone generation with global-geometry-aware latent encoding"☆48Aug 5, 2025Updated last year
- GNN trained to predict changes in thermodynamic stability for protein point mutants☆274Sep 9, 2026Updated 2 weeks ago
- ☆21Nov 21, 2025Updated 10 months ago
- ☆22Jan 23, 2026Updated 8 months ago
- 🏭 AI agent platform with skills for protein engineering, the noob-friendly AI tutorial tool for life science professionals. (ACL Demo202…☆249Updated this week
- ☆44Jun 12, 2025Updated last year
- Implementation of FoldMark: Safeguarding Protein Structure Generative Models with Distributional and Evolutionary Watermarking☆23Jul 30, 2026Updated last month
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- The codebase for EnzyGen2☆30Apr 20, 2026Updated 5 months ago
- ☆12Nov 16, 2023Updated 2 years ago
- VenusFSFP: Few-Shot Protein Fitness Prediction☆119Nov 18, 2025Updated 10 months ago
- [ICLR'26] Towards All-Atom Foundation Models for Biomolecular Binding Affinity Prediction☆23Jul 9, 2026Updated 2 months ago
- Versatile Embedding Network for Understanding protein Sequences☆26May 16, 2025Updated last year
- Monoclonal Antibody GEnerator (MAGE) - a fine-tuned LLM for generating paired heavy-light antibody variable sequences with predicted bind…☆83Jan 15, 2026Updated 8 months ago
- Code for humanization of antibody and nanobody☆96Aug 28, 2025Updated last year
- An agentic framework for autonomous protein design☆68May 1, 2026Updated 4 months ago
- A Unified Evaluation Suite for Protein Design☆140Jan 27, 2026Updated 8 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- List of papers on protein binding site prediction☆11Aug 11, 2023Updated 3 years ago
- A predictor of enzyme optimal temperature☆18Mar 13, 2025Updated last year
- RAG-ESM is a retrieval-augmented framework that allows to condition pretrained ESM2 protein language models on homologous sequences☆27Aug 21, 2025Updated last year
- Official Implementation of AMix-1, a Test-Time Scalable Protein Language Model.☆30Dec 10, 2025Updated 9 months ago
- Structure-based fragment identification in latent space☆31Mar 4, 2026Updated 6 months ago
- LatentDE: Latent-based Directed Evolution for Protein Sequence Design☆39Apr 2, 2025Updated last year
- Multiple Protein Structure Alignment at Scale with FoldMason☆283May 11, 2026Updated 4 months ago