jozhang97 / ismLinks
☆28Updated 5 months ago
Alternatives and similar repositories for ism
Users that are interested in ism are comparing it to the libraries listed below
Sorting:
- ☆65Updated last year
- This repository houses all the scripts and notebooks utilized for generating, analyzing, and validating the mdCATH dataset. Some user ex…☆44Updated 9 months ago
- Structure-conditioned masked language modeling for protein sequence design☆69Updated last year
- Aligning protein generative models with experimental fitness☆104Updated 3 weeks ago
- A benchmark for comprehensive evaluation on protein structure tokenization methods☆31Updated last month
- All-atom protein generation using latent diffusion, with compositional function and taxonomic prompts. http://bit.ly/plaid-proteins☆110Updated 3 months ago
- This is the official code repository for the paper FLOP: Tasks for Fitness Landscapes Of Protein wildtypes by Groth et al.☆22Updated 2 years ago
- Pytorch implementation for ICML 2024 paper Proteus: Exploring Protein Structure Generation for Enhanced Designability and Efficiency.☆80Updated last year
- ☆78Updated 2 months ago
- A comprehensive benchmark on the performances of multiple protein backbone generative models.☆64Updated 3 months ago
- ☆28Updated last month
- Codebase of the paper "Str2Str: A Score-based Framework for Zero-shot Protein Conformation Sampling" (ICLR 2024)☆77Updated last year
- MiniFold: Simple, Fast and Accurate Protein Structure Prediction☆36Updated last month
- Updated Protpardelle models with more robust motif scaffolding and multichain support☆28Updated this week
- Public Release of ProGen3 family of Models☆81Updated last month
- This is the official code repository for the paper NeurIPS 2024 spotlight paper "Kermut: Composite kernel regression for protein variant …☆32Updated 3 weeks ago
- ☆21Updated 9 months ago
- Send data to and from pymol from a remote server (e.g. a cluster running deep learning workflows)☆32Updated 6 months ago
- Sidechain conditioning and modeling for full-atom protein sequence design☆117Updated 2 months ago
- ☆28Updated 8 months ago
- Metrics to evaluate distributional coverage of generative models of protein structures.☆16Updated 2 weeks ago
- workflow used to prepare PPB-Affinity database☆27Updated last year
- Predicting mutational effects on protein binding from folding energy. ICML 2025.☆19Updated 3 weeks ago
- Sequence-Structure-Surface Model for Protein Fitness Prediction (S3F)☆43Updated 8 months ago
- Central repository for biomolecular foundation models with shared trainers and pipeline components☆118Updated this week
- ☆92Updated 10 months ago
- ☆46Updated 3 months ago
- composite-objective protein design☆75Updated last week
- ☆70Updated 2 months ago
- ☆22Updated 2 months ago