☆40Mar 30, 2025Updated last year
Alternatives and similar repositories for ism
Users that are interested in ism are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Pretrained METL models with minimal dependencies☆17Sep 18, 2025Updated 8 months ago
- ☆31Oct 7, 2025Updated 7 months ago
- ☆81Jun 29, 2025Updated 10 months ago
- Official code release for Ambient Protein Diffusion☆35Aug 30, 2025Updated 8 months ago
- Model for predicting micro-millisecond motions from protein sequence and/or structure☆79May 15, 2026Updated last week
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- Controlling the usage of hydrophobic residues on AfDesign for binder peptide design with AlphaFold hallucination protocol☆33Aug 10, 2023Updated 2 years ago
- Mutational Effect Transfer Learning (METL) framework for pretraining and finetuning biophysics-informed protein language models☆64Feb 3, 2026Updated 3 months ago
- Profluent-E1 family of Protein Encoder Models☆113Mar 11, 2026Updated 2 months ago
- All-atom inverse protein folding through discrete flow matching (ICML2025)☆32Mar 22, 2026Updated 2 months ago
- ☆33Feb 5, 2025Updated last year
- RAG-ESM is a retrieval-augmented framework that allows to condition pretrained ESM2 protein language models on homologous sequences☆27Aug 21, 2025Updated 9 months ago
- ☆37Nov 23, 2025Updated 6 months ago
- Proteina is a new large-scale flow-based protein backbone generator that utilizes hierarchical fold class labels for conditioning and rel…☆262Jul 24, 2025Updated 10 months ago
- 🧬 Augmenting zero-shot mutant prediction by retrieval-based logits fusion. (ISMB/ECCB 2025)☆133Apr 25, 2026Updated last month
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Code for designing binders to flexible peptides with AlphaFold2 Hallucination☆30Dec 21, 2023Updated 2 years ago
- Official repository for DiffPepBuilder and DiffPepDock tools☆128Oct 24, 2025Updated 7 months ago
- Updated Protpardelle models with more robust motif scaffolding and multichain support☆81May 1, 2026Updated 3 weeks ago
- CLIP-based model for aligning epitopes to immune receptors☆12Apr 30, 2025Updated last year
- GraphPart, a data partitioning method for ML on biological sequences☆35Oct 26, 2023Updated 2 years ago
- ☆31Dec 12, 2024Updated last year
- FAPLM: A Drop-in Efficient Pytorch Implementation of Protein Language Models☆168Mar 28, 2026Updated last month
- Efficient implementatin of ESM family.☆85Sep 9, 2025Updated 8 months ago
- ☆28Jun 16, 2025Updated 11 months ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- ☆68Mar 18, 2026Updated 2 months ago
- ☆23Apr 20, 2025Updated last year
- ☆134Updated this week
- Homomer symmetry prediction from protein sequence☆44Mar 13, 2025Updated last year
- ☆19Apr 7, 2025Updated last year
- A conditionally adapted protein language model for the generation of enzymes☆24Nov 26, 2024Updated last year
- ☆23Nov 28, 2025Updated 5 months ago
- ☆12Nov 16, 2023Updated 2 years ago
- Learning the language of protein-protein interactions☆148Apr 14, 2026Updated last month
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Sidechain conditioning and modeling for full-atom protein sequence design☆138Nov 11, 2025Updated 6 months ago
- Codebase of paper "Structure Language Models for Protein Conformation Generation" (ICLR'25)☆80Feb 24, 2025Updated last year
- Consolidated repository to perform RLXF☆41Mar 12, 2026Updated 2 months ago
- Sequence-Structure-Surface Model for Protein Fitness Prediction (S3F)☆51Dec 3, 2024Updated last year
- 🧬 Fusion of protein sequence and structural information, using denoising pre-training network for zero-shot protein engineering (eLife 2…☆91Apr 10, 2026Updated last month
- ☆52Apr 22, 2026Updated last month
- A package to create, visualize, and analysis PDB-derived pseudo-ensembles.☆10Jan 7, 2026Updated 4 months ago