☆43Mar 30, 2025Updated last year
Alternatives and similar repositories for ism
Users that are interested in ism are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Official code release for Ambient Protein Diffusion☆35Aug 30, 2025Updated last year
- ☆32Oct 7, 2025Updated last year
- ☆192Jul 24, 2026Updated 3 months ago
- Official repository for the Protriever paper☆17Jun 5, 2025Updated last year
- Efficient implementatin of ESM family.☆89Sep 9, 2025Updated last year
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- Structure-Informed Protein Language Model☆40Feb 15, 2024Updated 2 years ago
- Potts model-based protein sequence design☆120Jul 1, 2026Updated 4 months ago
- Extension of ThermoMPNN for double mutant predictions☆67Mar 23, 2026Updated 7 months ago
- Controlling the usage of hydrophobic residues on AfDesign for binder peptide design with AlphaFold hallucination protocol☆31Aug 10, 2023Updated 3 years ago
- ☆84Jun 29, 2025Updated last year
- Profluent-E1 family of Protein Encoder Models☆115Mar 11, 2026Updated 7 months ago
- ☆25Sep 25, 2026Updated last month
- A standardized protein design benchmark for motif-scaffolding problems☆83Aug 27, 2026Updated 2 months ago
- Biomolecular co-folding, binder filtering, and nanobody design☆93Jun 28, 2026Updated 4 months ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- ☆10Apr 1, 2024Updated 2 years ago
- Pooling by PageRank Token Importance. This is a weighted average pooling method where the weights are derived from the internal attention…☆19Jun 11, 2025Updated last year
- Pretrained METL models with minimal dependencies☆18Sep 16, 2026Updated last month
- ☆103Oct 6, 2026Updated 3 weeks ago
- Official Implementation of AMix-1, a Test-Time Scalable Protein Language Model.☆30Dec 10, 2025Updated 10 months ago
- ☆136Updated this week
- Official implementation of NeurIPS'24 paper "Bridge-IF: Learning Inverse Protein Folding with Markov Bridges"☆18Mar 16, 2025Updated last year
- ☆34Feb 5, 2025Updated last year
- ☆87Jun 10, 2026Updated 4 months ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Code and model weights for PoET-2, a retrieval-augmented multimodel protein language model for protein sequence generation and representa…☆31Aug 20, 2025Updated last year
- Code for designing binders to flexible peptides with AlphaFold2 Hallucination☆30Dec 21, 2023Updated 2 years ago
- Sidechain conditioning and modeling for full-atom protein sequence design☆150Nov 11, 2025Updated 11 months ago
- Homomer symmetry prediction from protein sequence☆46Mar 13, 2025Updated last year
- ☆21Nov 21, 2025Updated 11 months ago
- Origin-1: a generative AI platform for de novo antibody design against novel epitopes☆88Sep 25, 2026Updated last month
- GNN trained to predict changes in thermodynamic stability for protein point mutants☆279Sep 9, 2026Updated last month
- RAG-ESM is a retrieval-augmented framework that allows to condition pretrained ESM2 protein language models on homologous sequences☆29Aug 21, 2025Updated last year
- Updated Protpardelle models with more robust motif scaffolding and multichain support☆90Oct 2, 2026Updated last month
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- ☆160May 18, 2026Updated 5 months ago
- 🧬 Augmenting zero-shot mutant prediction by retrieval-based logits fusion. (ISMB/ECCB 2025)☆148Sep 29, 2026Updated last month
- All-atom inverse protein folding through discrete flow matching (ICML2025)☆47Mar 22, 2026Updated 7 months ago
- All-Atom (Including Hydrogen!) Ligand-Conditioned Protein Sequence Design & Sidechain Packing GNN☆96Sep 4, 2026Updated last month
- ☆17Updated this week
- ☆149Jun 16, 2026Updated 4 months ago
- ☆34Jun 9, 2026Updated 4 months ago