☆18May 8, 2023Updated 2 years ago
Alternatives and similar repositories for MutSpot
Users that are interested in MutSpot are comparing it to the libraries listed below
Sorting:
- This is a read-only mirror of the CRAN R package repository. speedglm — Fitting Linear and Generalized Linear Models to Large Data Sets…☆10May 6, 2023Updated 2 years ago
- ☆11Apr 25, 2024Updated last year
- Tool for analyzing the inter-mutational distances between SNV-SNV and INDEL-INDEL mutations. Tool separates mutations into clustered and …☆14Feb 26, 2026Updated 3 weeks ago
- BMI prediction from human photograph☆11Sep 14, 2021Updated 4 years ago
- GCAP (Gene-level Circular Amplicon Prediction) firstly implements extrachromosomal DNA detection from whole-exome-sequencing (WES) data a…☆21Aug 22, 2025Updated 7 months ago
- Python function for TMB snake plots☆16Feb 12, 2026Updated last month
- ☆18Jan 30, 2023Updated 3 years ago
- Functional Annotation for Single-Cell Transcriptomics☆11Jun 29, 2024Updated last year
- Clonal and subclonal Copy Number Alteration quality check integrating somatic mutation☆25Jan 28, 2026Updated last month
- ☆20Feb 27, 2026Updated 3 weeks ago
- cDriver R package for finding candidate driver genes in cancers☆18Jan 18, 2018Updated 8 years ago
- Implementation of MaSigPro for scRNA-Seq Data☆19Jul 31, 2024Updated last year
- ☆15Aug 11, 2025Updated 7 months ago
- Extracting gene sets from published pathway figures☆15May 23, 2023Updated 2 years ago
- ☆41Jun 24, 2025Updated 8 months ago
- Slides for my RLadies NYC Presentation☆11Feb 27, 2020Updated 6 years ago
- Perturbation-response Score (PS) analysis is a method to quantify diverse perturbation responses and discover novel biological insights i…☆17Apr 20, 2024Updated last year
- DriverPower☆26Jan 18, 2025Updated last year
- Accucopy is a computational method that infers Allele-Specific Copy Number alterations from low-coverage low-purity tumor sequencing data…☆17Mar 6, 2024Updated 2 years ago
- ☆28Sep 20, 2023Updated 2 years ago
- ☆24Jan 5, 2023Updated 3 years ago
- R package to do enrichment analysis for neoantigens☆13Feb 21, 2022Updated 4 years ago
- ☆11May 12, 2021Updated 4 years ago
- ☆14Mar 28, 2025Updated 11 months ago
- An automated pipe for reproducible RNA-seq analysis with the minimal efforts from researchers. You only need to provide the taxa name and…☆14Mar 4, 2022Updated 4 years ago
- Single-Cell Inference of Class Switch Recombination☆20Feb 11, 2026Updated last month
- A set of tools to annotate VCF files with expression and readcount data☆30Jan 30, 2026Updated last month
- R API for browsing, analyzing, and manipulating reference-aligned genome graphs in a GenomicRanges framework☆41Feb 27, 2026Updated 3 weeks ago
- ☆13Oct 7, 2019Updated 6 years ago
- ☆11May 4, 2021Updated 4 years ago
- CReSIL: Accurate Identification of Extrachromosomal Circular DNA from Long-read Sequences☆12Aug 21, 2025Updated 7 months ago
- High-throughput gene to knowledge mapping through massive integration of public sequencing data.☆31Feb 26, 2019Updated 7 years ago
- Visualizing Somatic Alterations of 10X Spatial Transcriptomics Data☆14Nov 7, 2024Updated last year
- Statistical quality evaluation of dimensionality reduction algorithms☆30Dec 17, 2025Updated 3 months ago
- Code to run OncoSig Analyses☆18Sep 30, 2020Updated 5 years ago
- CRCmapper: map core regulatory circuitry☆14Nov 23, 2020Updated 5 years ago
- Support code for NGS copy number algorithms. Takes a file of locations and a [cr|b]am file and generates a count of coverage of each alle…☆44Aug 24, 2022Updated 3 years ago
- Highly scalable integration and classification of single-cell RNA sequencing data☆11Dec 27, 2020Updated 5 years ago
- Cell age determination by scATAC-seq and bulk-ATAC-seq☆33Jan 30, 2026Updated last month