gambalab / gficfLinks
An R implementation of the Gene Frequency - Inverse Cell Frequency method for single cell data normalization
☆18Updated 2 years ago
Alternatives and similar repositories for gficf
Users that are interested in gficf are comparing it to the libraries listed below
Sorting:
- ☆38Updated last month
- Mitochondrial Alteration Enrichment and Genome Analysis Toolkit☆22Updated last year
- ☆32Updated 8 months ago
- ☆51Updated last year
- FastIntegrate integrates thousands of scRNA-seq datasets and outputs batch-corrected values for downstream analysis☆23Updated 11 months ago
- psupertime is pseudotime ordering for single cell RNA-seq data with sequential labels☆43Updated 3 years ago
- This repository contains scripts to identify healthy and malignant cells from scRNAseq with CloneTracer and process data from Optimized 1…☆26Updated 11 months ago
- Single-cell Case Control Analysis☆52Updated this week
- scWGCNA☆61Updated 2 years ago
- MarcoPolo is a clustering-free approach to the exploration of bimodally expressed genes along with group information in single-cell RNA-s…☆20Updated 10 months ago
- Analysis methods for analysing single cell RNA-seq data; particularly with the goal of checking if tentative clusters of cells are signif…☆38Updated 2 years ago
- Epigenetic cell-type deconvolution from Single-Cell Omic Reference profiles☆33Updated 6 months ago
- NATMI: Network Analysis Toolkit for the Multicellular Interactions☆35Updated 4 years ago
- Cell age determination by scATAC-seq and bulk-ATAC-seq☆32Updated last year
- Cell type specific enrichments using finemapped variants and quantitative epigenetic data☆45Updated 2 years ago
- ☆39Updated 4 years ago
- interactive visualization of single-cell transcriptomes☆11Updated last year
- ☆29Updated 2 years ago
- scTyper: a comprehensive pipeline for the cell typing analysis of single-cell RNA-seq data☆31Updated 2 years ago
- R package of CSOmap(developing☆13Updated 3 years ago
- ☆12Updated last year
- Uncertainty-aware quantification of Transposable Elements expression in scRNA-seq☆19Updated 3 weeks ago
- Independent Component Analysis decipher functional modules for better cell clustering and annotation☆17Updated 3 years ago
- Landscape Single Cell Entropy☆20Updated 5 years ago
- Analysis cell-type-specific functional gene network, with SCINET and HumanNetv3☆43Updated last month
- ☆18Updated last year
- Repository for the building, sharing and editing of scRNAseq pipelines for the Lung Cell Atlas☆38Updated 4 years ago
- R package IReNA☆28Updated 10 months ago
- ☆17Updated 6 years ago
- https://molecular-neurogenetics.github.io/truster/☆11Updated 2 months ago