An R implementation of the Gene Frequency - Inverse Cell Frequency method for single cell data normalization
☆20Aug 29, 2023Updated 3 years ago
Alternatives and similar repositories for gficf
Users that are interested in gficf are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Cluster Identity Predictor (R package implementation)☆22Aug 13, 2026Updated 2 months ago
- An R implementation of the Gene Frequency - Inverse Cell Frequency method for single cell data normalization☆15Oct 27, 2022Updated 3 years ago
- Individual level Differential Expression Analysis for Single cells☆28Dec 24, 2022Updated 3 years ago
- Stochastic simulation of next-generation sequencing data from neutrally evolving tumors☆10Nov 9, 2016Updated 9 years ago
- ☆40Jun 24, 2025Updated last year
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- cross-species analysis of cell identities, markers and regulations☆13Jul 11, 2025Updated last year
- ☆44Apr 5, 2021Updated 5 years ago
- ☆18May 30, 2022Updated 4 years ago
- Blood Transcription Modules for interpreting blood transcriptomics data☆11Nov 25, 2024Updated last year
- ☆13Nov 3, 2023Updated 2 years ago
- MOJITOO: a fast and universal method for integration of multimodal single cell data☆13Oct 23, 2024Updated last year
- This repository contains code for the evaluation of epithelial-to-mesenchymal transition states in cancer.☆13Jan 24, 2023Updated 3 years ago
- resVAE is a restricted latent variational autoencoder that we wrote to uncover hidden structures in gene expression data, especially usin…☆13Jan 30, 2023Updated 3 years ago
- Network analyses of single cell-based digital twins for personalized treatment of inflammatory disease☆17Mar 23, 2024Updated 2 years ago
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- A single-cell RNAseq differential expression analysis approach in case-control study☆10Mar 6, 2022Updated 4 years ago
- ☆17Jun 29, 2026Updated 3 months ago
- Build single sample pair-based (rule-based) classifiers using top-score pairs or random forest for multi-class problems.☆13May 1, 2023Updated 3 years ago
- https://molecular-neurogenetics.github.io/truster/☆12Jul 14, 2025Updated last year
- Identifying tumor cells at the single-cell level using machine learning☆51Nov 10, 2024Updated last year
- ☆17Jul 8, 2024Updated 2 years ago
- a variational autoencoder method for clustering single-cell mutation data☆11Apr 17, 2024Updated 2 years ago
- ☆15Aug 5, 2022Updated 4 years ago
- scDREAMER for atlas-level integration of single-cell datasets using deep generative model paired with adversarial classifier☆49Apr 12, 2024Updated 2 years ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- ☆38Jan 3, 2025Updated last year
- Updated scripts and pipelines for processing GESTALT data at single-cell resolution☆20May 22, 2021Updated 5 years ago
- This package removes unwanted variation from raw sequencing count data using Negative Binomial and/or Zero Inflated Negative Binomial mod…☆20Jun 13, 2024Updated 2 years ago
- Reproducibility for the "Harmonization and Annotation of Single-cell Transcriptomics data with Deep Generative Models" paper☆13Jul 15, 2022Updated 4 years ago
- a scalable python suite for tree inference and advanced pseudotime analysis from scRNAseq data.☆73Jul 9, 2026Updated 3 months ago
- Rcpp Machine Learning: Fast robust NMF, divisive clustering, and more☆124Apr 6, 2026Updated 6 months ago
- MarcoPolo is a clustering-free approach to the exploration of bimodally expressed genes along with group information in single-cell RNA-s…☆21Nov 17, 2024Updated last year
- SCDC☆52Jun 20, 2025Updated last year
- FastIntegrate integrates thousands of scRNA-seq datasets and outputs batch-corrected values for downstream analysis☆22Oct 25, 2024Updated last year
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- ☆25Aug 1, 2022Updated 4 years ago
- Paired Insertion Counting for snATAC-seq data☆19Aug 17, 2026Updated last month
- Version 2.1.0 released☆23Sep 16, 2019Updated 7 years ago
- ☆47May 4, 2024Updated 2 years ago
- Source code and data supporting "Evaluating measures of association for single-cell transcriptomics"☆17Feb 25, 2019Updated 7 years ago
- ☆17Jul 29, 2025Updated last year
- This R package for performing module repertoire analyses and generating fingerprint representations☆19Sep 16, 2021Updated 5 years ago