smithlabcode / riborexLinks
Riborex: Fast and flexible identification of differential translation from Ribo-seq data
☆10Updated 4 years ago
Alternatives and similar repositories for riborex
Users that are interested in riborex are comparing it to the libraries listed below
Sorting:
- HOT regions paper☆11Updated 6 years ago
- Transcriptome-wide network☆16Updated 5 years ago
- R package for reading in & working with NucleoATAC outputs☆26Updated 6 years ago
- R package wrapping bedtools☆41Updated 3 months ago
- Flexible Bayesian inference of mutational signatures☆35Updated 2 years ago
- Scripts and software supplement for "Gene-level differential analysis at transcript-level resolution" by Yi, Pimentel, Bray and Pachter☆19Updated 7 years ago
- A toolkit for working with ATAC-seq data.☆24Updated last year
- An R Package based on JavaScript libraries for Visualization of Interactive Circos Plot☆28Updated 2 years ago
- DriverPower☆26Updated 5 months ago
- A Package For Predicting The Disruptiveness Of Single Nucleotide Polymorphisms On Transcription Factor Binding Sites.☆29Updated 11 months ago
- Provides Quality Control of sequencing samples by deducing if there is batch effect and adjusts for it.☆35Updated last year
- ☆23Updated 4 years ago
- Relative Abundance of Transcripts: An R package for the detection of Differential Transcript isoform Usage.☆34Updated 3 years ago
- A small R package to make sequencing read coverage plots in R.☆39Updated 3 years ago
- Utility functions for FACETS☆37Updated last year
- an R/Shiny application for interactive creation of non-circular plots of whole genomes☆45Updated 2 months ago
- Interactive R package to quantify, analyse and visualise alternative splicing☆37Updated last week
- Single-cell Bisulfite Sequencing Data Mapping☆12Updated 4 years ago
- A tool kit for dissecting cancer evolution from multi-region derived tumor biopsies via somatic mutations☆36Updated 3 years ago
- A flexible framework to annotate and prioritize cancer somatic mutations.☆8Updated 8 years ago
- RNA-seq workflow: differential transcript usage☆22Updated last year
- Package Homepage: http://bioconductor.org/packages/devel/bioc/html/annotatr.html Bug Reports: https://support.bioconductor.org/p/new/post…☆27Updated 2 weeks ago
- ☆13Updated 7 years ago
- Allele-Specific Expression by Single-Cell RNA Sequencing☆28Updated 4 years ago
- a peak-calling and differential analysis tool for replicated ChIP-Seq data☆37Updated 3 years ago
- Code for differential splicing comparison paper (Soneson, Matthes, et al.)☆20Updated 9 years ago
- a set of NGS pipelines☆24Updated 2 weeks ago
- An R for fast and flexible DNA methylation analysis☆31Updated last week
- A multi-method comparative bioinformatics pipeline to detect and study circRNAs from RNA-seq data☆16Updated 5 years ago
- Pipeline for Quality Control of Ribo-Seq data, selection of P-site offsets, and codon usage statistics.☆18Updated last year