cyang235 / LncADeepLinks
LncADeep is an ab initio lncRNA identification and functional annotation tool based on deep learning
☆27Updated 7 years ago
Alternatives and similar repositories for LncADeep
Users that are interested in LncADeep are comparing it to the libraries listed below
Sorting:
- Bioinformatic tool for Splice site Strength Estimation using RNA-seq☆17Updated this week
- Identifying genome-wide translated open reading frames using ribosome profiling☆23Updated 2 years ago
- ChIP-seq pipeline tool for quality check, normalization, statistical analysis, and visualization of multiple ChIP-seq samples.☆24Updated last week
- Long-read Isoform Quantification and Analysis☆38Updated 3 months ago
- A script to make downloading of SRA/GEO data easier☆31Updated last year
- Modeling the genomic regulatory codes of fly, mouse, worm, and fish with deep learning☆17Updated 4 years ago
- First version of PORE-cupine. Detecting SHAPE modification using direct RNA sequencing☆14Updated 2 years ago
- Concurrent identification of m6A and m5C modifications in individual molecules from nanopore sequencing☆40Updated 11 months ago
- Long read to rMATS☆31Updated 2 years ago
- A detailed guide to analise and integrate small-RNASeq and RNASeq samples using miARma-Seq☆11Updated 5 years ago
- Comprehensive and scalable differential splicing analyses☆17Updated 4 months ago
- A library for counting small kmer frequencies in nucleotide sequences.☆28Updated 8 months ago
- ☆34Updated 2 years ago
- Benchmarking long-read RNA-seq analysis tools☆27Updated 5 months ago
- General Use Scripts and Helper functions☆16Updated 7 years ago
- ☆17Updated last year
- microRNA PREdiction From small RNA-seq data☆29Updated 7 years ago
- A tool for accurately detecting actively translating ORFs from Ribo-seq data☆38Updated 5 months ago
- ☆11Updated 3 years ago
- A guide to running MaxQuant in Linux☆33Updated 5 years ago
- An unbiased method for genome-wide CBE off-targets assessment☆13Updated 2 years ago
- IRESfinder is a python package for the identification of RNA internal ribosome entry site in eukaryotic cell☆19Updated 3 years ago
- ☆12Updated 4 years ago
- isoCirc☆10Updated last year
- A list of alternative splicing analysis resources☆44Updated 3 months ago
- Comprehensive analysis of small RNA sequencing data☆32Updated 2 months ago
- Versatile FASTA/FASTQ demultiplexer.☆33Updated last year
- ☆23Updated 4 years ago
- tspex: tissue-specificity calculator☆32Updated 2 years ago
- Tool package to perform in-silico CRISPR analysis and assessment☆29Updated last year