cyang235 / LncADeep
LncADeep is an ab initio lncRNA identification and functional annotation tool based on deep learning
☆26Updated 6 years ago
Alternatives and similar repositories for LncADeep:
Users that are interested in LncADeep are comparing it to the libraries listed below
- Identifying genome-wide translated open reading frames using ribosome profiling☆21Updated last year
- Bioinformatic tool for Splice site Strength Estimation using RNA-seq☆14Updated 2 years ago
- Modeling the genomic regulatory codes of fly, mouse, worm, and fish with deep learning☆16Updated 3 years ago
- Identifying differentially methylated regions from MethylC-seq (bisulfite-sequencing) data☆27Updated last year
- First version of PORE-cupine. Detecting SHAPE modification using direct RNA sequencing☆14Updated last year
- ☆14Updated 2 years ago
- A script to make downloading of SRA/GEO data easier☆31Updated last year
- A detailed guide to analise and integrate small-RNASeq and RNASeq samples using miARma-Seq☆11Updated 5 years ago
- ☆11Updated 2 years ago
- Long read to rMATS☆31Updated last year
- Concurrent identification of m6A and m5C modifications in individual molecules from nanopore sequencing☆38Updated 5 months ago
- microRNA PREdiction From small RNA-seq data☆29Updated 7 years ago
- RNA editing quantification in deep transcriptome data☆15Updated 2 years ago
- ☆33Updated last year
- A statistical tool to detect differential alternative splicing events using single-cell RNA-seq☆21Updated last year
- Motif Scan and Enrichment Analysis (MoSEA)☆16Updated 4 years ago
- 将速铂下载工具进行封装，以便高效方便地批量下载SRA测序数据。☆10Updated 4 years ago
- ☆34Updated 2 years ago
- HLA typing for Sanger Based Test☆17Updated last year
- General Use Scripts and Helper functions☆16Updated 6 years ago
- RPKM for RNASeq counts☆16Updated 4 years ago
- MetaLogo: a heterogeneity-aware sequence logo generator and aligner☆20Updated last year
- lncRNA-screen☆26Updated 7 years ago
- ☆29Updated 7 months ago
- Bioinformatic pipeline for identifying dsDNA breaks by marker based incorporation, such as breaks induced by designer nucleases like Cas9…☆21Updated last month
- An unbiased method for genome-wide CBE off-targets assessment☆13Updated last year
- New version of JACUSA -> 2.0☆23Updated this week
- A networks analysis pipeline for RNASeq time series data☆14Updated 4 years ago
- Computational framework to identify promoter sequences from RNA-seq datasets☆10Updated last year
- Penguin: A Tool for Predicting Pseudouridine Sites in Direct RNA Nanopore Sequencing Data☆13Updated 3 years ago