vladimirsouza / lrRNAseqVariantCallingLinks
Codes for the Iso-Seq variant-calling paper
☆11Updated 2 years ago
Alternatives and similar repositories for lrRNAseqVariantCalling
Users that are interested in lrRNAseqVariantCalling are comparing it to the libraries listed below
Sorting:
- ☆16Updated 8 months ago
- ☆20Updated 3 years ago
- Automated Detection and Qualification of Differential Methylation☆14Updated last year
- Location of public benchmarking; primarily final results☆18Updated 7 months ago
- Immuological gene typing and annotation for genome assembly☆38Updated 6 months ago
- An accurate repeat detection from Nanopore data using deep learning and image techniques☆23Updated 2 years ago
- ☆38Updated 2 years ago
- Structural variant merging tool☆55Updated last year
- A deep learning-based SNP calling method to identify SNPs based on low-coverage Nanopore sequencing reads.☆21Updated 2 years ago
- Automatised pipeline of ConsensuSV workflow.☆24Updated 2 years ago
- ☆23Updated 9 months ago
- A pipeline to detect chimeric transcripts derived from genes and transposable elements.☆30Updated 2 months ago
- ☆19Updated last year
- Sample Contamination Estimate from VCF☆21Updated 11 months ago
- Allo: a multi-mapped read rescue strategy for gene regulatory analyses☆24Updated last year
- Structural variant (SV) analysis tools☆38Updated last year
- Structural variant VCF annotation, duplicate removal and comparison☆34Updated 7 months ago
- ☆11Updated 3 months ago
- Two pass alignment for long reads☆22Updated 4 years ago
- ☆15Updated last year
- Scripts and files used in the generation of the COLO829 somatic SV truthset.☆13Updated 3 years ago
- Tools to gather evidence for structural variation via breakpoint detection.☆19Updated 5 months ago
- Toolkit for genome-wide analysis of tandem repeats☆58Updated last week
- ☆23Updated 4 months ago
- SpliceWiz is an R package for exploring differential alternative splicing events in splice-aware alignment BAM files.☆21Updated 6 months ago
- ☆22Updated 2 months ago
- ☆18Updated last year
- Genotyping of segregating mobile elements insertions☆19Updated 4 years ago
- A pipeline creation tool using Snakemake☆11Updated this week
- VCF files of SVs using long-read sequencing (LRS).☆22Updated 3 years ago