UCSC-LoweLab / tRNAscan-SELinks
A program for detection of tRNA genes
☆61Updated 2 years ago
Alternatives and similar repositories for tRNAscan-SE
Users that are interested in tRNAscan-SE are comparing it to the libraries listed below
Sorting:
- FastOMA is a scalable software package to infer orthology relationship.☆76Updated this week
- Protein hint generation pipeline for gene finding in eukaryotic genomes☆57Updated last year
- CGView is a Java package for generating high-quality, zoomable maps of circular genomes.☆44Updated 11 months ago
- genEra is a fast and easy-to-use command-line tool that estimates the age of the last common ancestor of protein-coding gene families.☆52Updated 6 months ago
- The SYNY pipeline investigates synteny between species by reconstructing protein clusters from gene pairs.☆43Updated 2 months ago
- Tiberius is a deep learning gene finder.☆65Updated last week
- A tool for generating bacterial genomes from metagenomes with nanopore long read sequencing☆70Updated 3 years ago
- NLR annotation tool☆28Updated last year
- PATO is a R package designed to analyze pangenomes (set of genomes) intra or inter species.☆58Updated last year
- Binning Virus Genomes from Metagenomes☆65Updated 2 years ago
- SHOOT.bio - the phylogenetic search engine☆25Updated 2 years ago
- Best practices and workflow for genome annotation☆77Updated 2 months ago
- IQ-TREE version 3: software for phylogenetics☆48Updated this week
- ☆34Updated last year
- Improved Inference of Ortholog Groups using Hidden Markov Models☆35Updated 3 months ago
- A comparative genomics workflow using Nextflow, conda, Julia and R☆44Updated last year
- Effector prediction pipeline based on protein properties.☆15Updated 9 months ago
- TransPi – a comprehensive TRanscriptome ANalysiS PIpeline for de novo transcriptome assembly☆27Updated 3 years ago
- An R package designed for drawing gene arrow maps☆79Updated last week
- ☆54Updated last year
- ☆72Updated last month
- PanPhlAn is a strain-level metagenomic profiling tool for identifying the gene composition of individual strains in metagenomic samples☆45Updated last year
- Wrapper for the genoPlotR R package. This wrapper makes phylogeny, genbank files and blast comparisons that is needed for the genoPLotR p…☆14Updated 3 years ago
- Automatically exported from code.google.com/p/prottest3☆37Updated 7 years ago
- GTDB taxonomy taxdump files with trackable TaxIds☆54Updated last month
- The Prokaryotic Genomics and Comparative Genomics Analysis Pipeline☆38Updated 2 years ago
- Prediction of apoplastic and cytoplasmic effectors in fungi and oomycetes☆22Updated 3 years ago
- BRIG is a cross-platform (Windows/Mac/Unix) application that can display circular comparisons between a large number of genomes, with a f…☆34Updated 6 years ago
- hifiasm_meta - de novo metagenome assembler, based on hifiasm, a haplotype-resolved de novo assembler for PacBio Hifi reads.☆67Updated 6 months ago
- ☆74Updated 3 months ago