Alternatives and similar repositories for infernal:

Users that are interested in infernal are comparing it to the libraries listed below

• soedinglab / plass
  sensitive and precise assembly of short sequencing reads
  ☆153Updated 6 months ago
• IndexThePlanet / Logan
  Logan Unitigs and Contigs
  ☆126Updated this week
• urmi-21 / orfipy
  Fast and flexible ORF finder
  ☆69Updated 3 years ago
• KatyBrown / CIAlign
  ☆125Updated 7 months ago
• Russel88 / CRISPRCasTyper
  CCTyper: Automatic detection and subtyping of CRISPR-Cas operons
  ☆100Updated last year
• gem-pasteur / macsyfinder
  MacSyFinder - Detection of macromolecular systems in protein datasets using systems modelling and similarity search.
  ☆61Updated 4 months ago
• guyleonard / get_jgi_genomes
  A quick and easy way to download the genomes/predicted proteins of taxa available in JGI's Genome Portal.
  ☆35Updated 7 months ago
• soedinglab / metaeuk
  MetaEuk - sensitive, high-throughput gene discovery and annotation for large-scale eukaryotic metagenomics
  ☆183Updated 9 months ago
• MiguelMSandin / SSNetworks
  A brief, quick and dirty introduction to Sequence Similarity Networks
  ☆21Updated 2 years ago
• medema-group / BiG-SCAPE
  Similarity networks of biosynthetic gene clusters
  ☆104Updated this week
• steineggerlab / Metabuli
  Metabuli: specific and sensitive metagenomic classification via joint analysis of DNA and amino acid.
  ☆132Updated last month
• EBI-Metagenomics / genomes-catalogue-pipeline
  MGnify genome analysis pipeline
  ☆105Updated 2 weeks ago
• art-egorov / lovis4u
  Bioinformatics tool for Locus Visualisation
  ☆96Updated 3 weeks ago
• RyanCook94 / inphared
  Providing up-to-date phage genome databases, metrics and useful input files for a number of bioinformatic pipelines.
  ☆67Updated 3 months ago
• DessimozLab / read2tree
  a tool for inferring species tree from sequencing reads
  ☆148Updated last month
• gamcil / cblaster
  Find clustered hits from a BLAST search
  ☆111Updated 4 months ago
• gbouras13 / phold
  Phage Annotation using Protein Structures
  ☆103Updated this week
• glarue / jgi-query
  A simple command-line tool to download data from Joint Genome Institute databases
  ☆51Updated 2 years ago
• BioinformaticsLabAtMUN / Promotech
  Machine-learning-based general bacterial promoter prediction tool.
  ☆45Updated last year
• ncbi / egapx
  Eukaryotic Genome Annotation Pipeline-External caller scripts and documentation
  ☆124Updated last week
• rcedgar / usearch12
  Open-source usearch
  ☆109Updated 9 months ago
• AnimaTardeb / G4Hunter
  G4Hunter (2012_2015)- IECB - Bordeaux
  ☆13Updated 5 years ago
• mmcguffi / pLannotate
  Webserver and command line tool for annotating engineered plasmids
  ☆117Updated last month
• inab / trimal
  A tool for automated alignment trimming in large-scale phylogenetic analyses. Development version: 2.0
  ☆202Updated this week
• zhaotao1987 / SynNet-Pipeline
  Workflow for Building Microsynteny Networks
  ☆53Updated 2 years ago
• kblin / ncbi-acc-download
  Download files from NCBI Entrez by accession
  ☆121Updated 7 months ago
• althonos / rich-msa
  A Rich renderable for viewing Multiple Sequence Alignments in the terminal.
  ☆80Updated 2 years ago
• refresh-bio / FAMSA
  Algorithm for ultra-scale multiple sequence alignments (3M protein sequences in 5 minutes and 24 GB of RAM)
  ☆154Updated 6 months ago
• sagnikbanerjee15 / Finder
  A fully automated gene annotator from RNA-Seq expression data
  ☆61Updated last year
• Weeks-UNC / shapemapper2
  Public repository for ShapeMapper 2 releases
  ☆34Updated 4 months ago