A fast tool for detecting and decomposing segmental duplications in genome assemblies
☆57Jul 19, 2025Updated 10 months ago
Alternatives and similar repositories for biser
Users that are interested in biser are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Segmental duplication detection tool☆15Feb 7, 2023Updated 3 years ago
- Make colorful identity heatmaps of genomic sequence☆137May 24, 2024Updated 2 years ago
- ☆32Feb 14, 2026Updated 3 months ago
- A genome-scale, fast, and precise segmental duplications mapping tool☆36Sep 11, 2024Updated last year
- ☆41Jun 8, 2023Updated 3 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Identification of segmental duplications in the genome☆29Mar 1, 2022Updated 4 years ago
- ☆41Oct 6, 2025Updated 8 months ago
- ☆191Feb 10, 2026Updated 4 months ago
- RepeatIdentifier☆74Mar 19, 2025Updated last year
- Figures for the CHM13 T2T SD paper.☆12Sep 12, 2021Updated 4 years ago
- ☆161Apr 13, 2026Updated last month
- R package to draw syntenic plots in 3 different styles☆46Feb 2, 2026Updated 4 months ago
- ☆42May 19, 2025Updated last year
- A viewer for multiple alignment format (MAF) files in JBrowse 2☆14Jun 3, 2026Updated last week
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Invertory of TE-gene isoforms☆14Sep 18, 2023Updated 2 years ago
- The complete sequence of a Chinese individual☆13Oct 8, 2024Updated last year
- An ultra-fast and efficient genomic tool for coverage calculation☆172Feb 9, 2026Updated 4 months ago
- Algorithm For Gene Order Reconstruction in Ancestors☆83Aug 16, 2025Updated 9 months ago
- This is the standalone version of the EviAnn pipeline☆151May 14, 2026Updated 3 weeks ago
- ☆18Jan 29, 2025Updated last year
- De novo chromosome-level scaffolding and phasing tool using Hi-C☆30Nov 23, 2025Updated 6 months ago
- TEtrimmer: a novel tool to automate manual curation of transposable elements☆113May 19, 2026Updated 3 weeks ago
- HELIANO is a software for detection and classification of Helitron-like elements.☆33Jun 10, 2025Updated last year
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- A genome completeness evaluation tool based on miniprot☆245Sep 18, 2025Updated 8 months ago
- Tool for globally phasing diploid assembly graphs with orthogonal data☆43Nov 25, 2024Updated last year
- MCHelper: An automatic tool to curate transposable element libraries☆46May 6, 2026Updated last month
- ☆15Jul 21, 2022Updated 3 years ago
- Reconstruction of ancestral genome maps☆16Mar 29, 2018Updated 8 years ago
- Neural network classification of TE☆100Apr 3, 2026Updated 2 months ago
- Convert RepeatMasker ".out" file into a gff3 with colors!!!☆26Aug 20, 2020Updated 5 years ago
- A program for assessing the T2T genome continuity and completeness☆95Feb 28, 2026Updated 3 months ago
- A filter algorithm with program to filter an alignment or mapping file☆12May 15, 2025Updated last year
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- SINE annotation tool for plant genomes☆19Jan 21, 2024Updated 2 years ago
- oxford dot plots☆171May 25, 2026Updated 2 weeks ago
- A gap-closing software tool that uses long reads to enhance genome assembly.☆24Apr 25, 2024Updated 2 years ago
- Genome alignment and synteny plots☆35Mar 24, 2026Updated 2 months ago
- Inferring natural selection by comparative population genomic analysis across species☆27Oct 31, 2023Updated 2 years ago
- A single fast and exhaustive tool for summary statistics and simultaneous *fa* (fasta, fastq, gfa [.gz]) genome assembly file manipulatio…☆123Apr 28, 2026Updated last month
- ☆18Nov 9, 2020Updated 5 years ago