TencentAILabHealthcare / spatialIDLinks
☆40Updated 2 years ago
Alternatives and similar repositories for spatialID
Users that are interested in spatialID are comparing it to the libraries listed below
Sorting:
- ☆59Updated last year
- GASTON: deep learning algorithm learns "topography" of a tissue slice from spatial transcriptomics data☆59Updated 2 months ago
- ☆37Updated 3 months ago
- ☆19Updated 3 years ago
- Spatial Cellular Estimator for Tumors☆57Updated 3 weeks ago
- These are scripts for pan-cacner B cells analyses.☆54Updated last year
- Join subcellular Visium HD bins into cells☆121Updated 3 months ago
- A Python package for the identification, characterization and comparison of spatial clusters from spatial -omics data.☆130Updated this week
- Spatial mapping of cell types by integration of transcriptomics data☆94Updated 3 years ago
- RA Synovial Single-cell Multimodal Cell Atlas☆17Updated last year
- The benchmarking of spatial transcriptomics deconvolution methods☆32Updated 2 years ago
- Integrative and Reference-Informed Spatial Domain Detection for Spatial Transcriptomics☆37Updated 7 months ago
- Spot pseudo-Imager on top of histology☆40Updated 5 months ago
- ☆125Updated 3 years ago
- TACCO: Transfer of Annotations to Cells and their COmbinations☆55Updated last week
- ☆31Updated last month
- Detect hierarchical structures in cell-cell communications☆15Updated 7 months ago
- A tool for semi-automatic cell type harmonization and integration☆110Updated 5 months ago
- CytoSPACE: Optimal mapping of scRNA-seq data to spatial transcriptomics data☆132Updated 6 months ago
- Bayesian Analytics for Spatial Segmentation☆29Updated 4 months ago
- ☆50Updated 3 months ago
- Clone Calling from Visium Spatial Transcriptomics of Cancer samples☆78Updated 2 years ago
- inferring regulatory cellular dynamics☆56Updated this week
- Spatial transcriptome analysis in python☆24Updated 7 months ago
- ☆123Updated 4 months ago
- Code used to benchmark Xenium☆66Updated last year
- ☆20Updated 10 months ago
- Construct Tumor Transition Zone Microenvironment☆48Updated 2 months ago
- ☆123Updated last year
- BANKSY: spatial clustering☆120Updated last month